FC921433

Overview
NameFC921433
Unique NameFC921433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: CYSA_XANCP (Sulfate/thiosulfate import ATP-binding protein cysA OS=Xanthomonas campestris pv. campestris GN=cysA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 81/218 (37.16%), Postives = 120/218 (55.05%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGF-LLYENSKMR--DEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            L  ++  +R GE + ++GPSG+GK+T+L+I+AGL   D G+V + G + A  +S   +   R+G VFQ  ALF  + V EN+ F L     K R  + +I   V+E LA V L+G+E R P++LSGG ++RVALAR++       ++EP VLL DEP   LD      +   +R +H+  + GL         V VTH         DR+  L  G+I
Sbjct:   18 LDDITLDVRQGELLALLGPSGSGKTTLLRIMAGLEHADGGQV-LFGDEDATRMS---VQSRRVGFVFQHYALFKHMDVFENIAFGLRVRRGKERWAEARIRARVEELLALVQLQGLEQRYPTQLSGGQRQRVALARAL-------AIEPRVLLLDEPFGALDAQVRRDLRRWLRELHE--QTGLTT-------VFVTHDQEEALELADRVAILNRGRI 215          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: CYSA_MYCTU (Sulfate/thiosulfate import ATP-binding protein cysA OS=Mycobacterium tuberculosis GN=cysA PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 78/212 (36.79%), Postives = 111/212 (52.36%), Query Frame = 3
Query:   24 VSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            V F +  G    ++GPSG+GKST+L+ IAGL  PD G + I GR     ++        IG VFQ  A F  LTVR+NV F L    + + E I   V   L  VGL G + R P++LSGG ++R+ALAR++       +V+PEVLL DEP   LD      +   +R +H +            + V+VTH  +      DR+  L++G+I
Sbjct:   25 VDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGTITINGRD----VTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAFGLKIRKRPKAE-IKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARAL-------AVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVH---------VTTVLVTHDQAEALDVADRIAVLHKGRI 215          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: CYSA_MYCBO (Sulfate/thiosulfate import ATP-binding protein cysA OS=Mycobacterium bovis GN=cysA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 78/212 (36.79%), Postives = 111/212 (52.36%), Query Frame = 3
Query:   24 VSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            V F +  G    ++GPSG+GKST+L+ IAGL  PD G + I GR     ++        IG VFQ  A F  LTVR+NV F L    + + E I   V   L  VGL G + R P++LSGG ++R+ALAR++       +V+PEVLL DEP   LD      +   +R +H +            + V+VTH  +      DR+  L++G+I
Sbjct:   25 VDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGTITINGRD----VTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAFGLKIRKRPKAE-IKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARAL-------AVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVH---------VTTVLVTHDQAEALDVADRIAVLHKGRI 215          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: CYSA_BACC1 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bacillus cereus (strain ATCC 10987) GN=cysA PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 76/218 (34.86%), Postives = 112/218 (51.38%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKM---RDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            L  +   I  GE V ++GPSG+GK+T+L+IIAGL   D+G +   G      ++D  +   ++G VFQ  ALF  + V ENV F L    K      E I E V E L  V + G   R P++LSGG ++R+ALAR++       +VEP++LL DEP   LD      +   +R +H + +          + V VTH         DR++ + EG+I
Sbjct:   18 LTDIHLDIPKGELVALLGPSGSGKTTLLRIIAGLEEADEGSISFEGED----LTDIHVKNRQVGFVFQHYALFKHMNVFENVAFGLKVRKKSLRPSAEAIEEKVTELLKLVKMDGFAKRYPAQLSGGQRQRIALARAL-------AVEPKILLLDEPFGALDAKVRKELRRWLRKLHDEFQ---------ITSVFVTHDQEEALDVADRIVVMNEGRI 215          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: POTA_STRA5 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus agalactiae serotype V GN=potA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 78/217 (35.94%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   12 ILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            +L+ ++F++  G+   ++G SG+GKSTIL IIAGLL    G++Y+ G++    I+D   +   +  VFQ+ ALF  +TV ENV F L +  KM  ++I + V+E L  V L+G E R   +LSGG ++RVA+AR+II        +P+V+L DEP + LD    T ++  +R + ++   G+       ++V VTH         D +  + EG+IV
Sbjct:   22 VLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLEASTGDIYLDGKR----INDVPTNKRDVHTVFQNYALFPHMTVFENVAFPL-KLKKMDKKEIQKRVQETLKMVRLEGFEKRAIQKLSGGQRQRVAIARAII-------NQPKVVLLDEPLSALDLKLRTEMQYELRELQQR--LGI-------TFVFVTHDQEEALAMSDWIFVMNEGEIV 217          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: POTA_STRA3 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus agalactiae serotype III GN=potA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 78/217 (35.94%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   12 ILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            +L+ ++F++  G+   ++G SG+GKSTIL IIAGLL    G++Y+ G++    I+D   +   +  VFQ+ ALF  +TV ENV F L +  KM  ++I + V+E L  V L+G E R   +LSGG ++RVA+AR+II        +P+V+L DEP + LD    T ++  +R + ++   G+       ++V VTH         D +  + EG+IV
Sbjct:   22 VLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLEASTGDIYLDGKR----INDVPTNKRDVHTVFQNYALFPHMTVFENVAFPL-KLKKMDKKEIQKRVQETLKMVRLEGFEKRAIQKLSGGQRQRVAIARAII-------NQPKVVLLDEPLSALDLKLRTEMQYELRELQQR--LGI-------TFVFVTHDQEEALAMSDWIFVMNEGEIV 217          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: POTA_STRA1 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus agalactiae serotype Ia GN=potA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 78/217 (35.94%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   12 ILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            +L+ ++F++  G+   ++G SG+GKSTIL IIAGLL    G++Y+ G++    I+D   +   +  VFQ+ ALF  +TV ENV F L +  KM  ++I + V+E L  V L+G E R   +LSGG ++RVA+AR+II        +P+V+L DEP + LD    T ++  +R + ++   G+       ++V VTH         D +  + EG+IV
Sbjct:   22 VLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLEASTGDIYLDGKR----INDVPTNKRDVHTVFQNYALFPHMTVFENVAFPL-KLKKMDKKEIQKRVQETLKMVRLEGFEKRAIQKLSGGQRQRVAIARAII-------NQPKVVLLDEPLSALDLKLRTEMQYELRELQQR--LGI-------TFVFVTHDQEEALAMSDWIFVMNEGEIV 217          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: POTA_MYCMS (Spermidine/putrescine import ATP-binding protein potA OS=Mycoplasma mycoides subsp. mycoides SC GN=potA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 74/217 (34.10%), Postives = 118/217 (54.38%), Query Frame = 3
Query:   12 ILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLD-PIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            +L+G+SF ++ GE + ++GPSG GK+TILKII G   P+ GE+    +    +     I+  +   +FQS ALF  L V +NV F L    K + + I   V   +  VGL+G E++   ELSGG K+R+A+AR+++       ++P+VLL DEP A LD  +  T+ E+L R     G           ++++V+H         DR++ + +G I
Sbjct:   20 VLKGISFNVKEGEFITLLGPSGCGKTTILKIIGGSQKPNSGEILFEDKNLIPI----PINKRQFNTIFQSYALFPHLNVFDNVAFGL-TIKKTKKDIIEREVMRQIRQVGLEGYENKKIDELSGGQKQRIAIARALV-------MKPKVLLLDEPMAALDVKLRKTMQEELKRLQQDIG----------ITFIMVSHDQEEALSMSDRIVVMNQGTI 214          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: POTA_DESDG (Spermidine/putrescine import ATP-binding protein potA OS=Desulfovibrio desulfuricans (strain G20) GN=potA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 75/215 (34.88%), Postives = 123/215 (57.21%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            L  +  +IR+GE + ++GPSG GK+TIL++++G   P  G+V + GR    +++D      ++  VFQ+ ALF  +TVR+NVGF L    + +DE I+  V+E L  V L+   DR P+ LSGG ++RVA+AR+++ +       P VLL DEP + LD      ++  I+  H + + G+       ++V VTH         DR++ + +G+I
Sbjct:   23 LENIDLQIRNGEFLTLLGPSGCGKTTILRLLSGFETPSSGDVILSGR----VVNDVPPEQRQVNTVFQNYALFPHMTVRDNVGFGLKMQKRPKDE-IARRVREALKMVHLEQFGDRKPARLSGGQQQRVAIARAVVNN-------PYVLLLDEPFSALDFKLRKKMQLEIK--HLQRQLGI-------TFVFVTHDQEEAFAMSDRVVVMNDGRI 216          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_LEGPL (Methionine import ATP-binding protein metN OS=Legionella pneumophila (strain Lens) GN=metN PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 77/220 (35.00%), Postives = 122/220 (55.45%), Query Frame = 3
Query:    6 KHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLI-SDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            K  L  ++  I+ GE  G+IG SG GKST+L+ I  L  PD+GEV I G+    L   D  ++  +I ++FQ   L +S TV +N+  L      + +E I + ++E L  V L   +D  PS+LSGG K+RVA+AR++       S  P+VLL DE T+ LDP  +  +  L++ +++    G+       + V++TH+   ++R   RL  + +GKIV
Sbjct:   14 KLALNDINLFIQEGEVFGVIGKSGAGKSTLLRCINILEKPDEGEVVIDGQNLMSLSRKDLALARHKIAMIFQHFNLLNSKTVFDNIA-LPMRIQGIDEESIKQKIEELLPVVELTDKKDAFPSQLSGGQKQRVAIARAL-------SCSPKVLLCDEATSALDPATTDAILSLLKKINEL--YGI-------TIVLITHEMDVVKRICQRLSVMVDGKIV 216          
The following BLAST results are available for this feature:
BLAST of FC921433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSA_XANCP7.117e-2637.16Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_MYCTU7.117e-2636.79Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_MYCBO7.117e-2636.79Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BACC17.117e-2634.86Sulfate/thiosulfate import ATP-binding protein cys... [more]
POTA_STRA59.295e-2635.94Spermidine/putrescine import ATP-binding protein p... [more]
POTA_STRA39.295e-2635.94Spermidine/putrescine import ATP-binding protein p... [more]
POTA_STRA19.295e-2635.94Spermidine/putrescine import ATP-binding protein p... [more]
POTA_MYCMS9.295e-2634.10Spermidine/putrescine import ATP-binding protein p... [more]
POTA_DESDG9.295e-2634.88Spermidine/putrescine import ATP-binding protein p... [more]
METN_LEGPL9.295e-2635.00Methionine import ATP-binding protein metN OS=Legi... [more]

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Properties
Property NameValue
Genbank descriptionC32104H07EF RVDevelopN Citrus clementina cDNA clone C32104H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921433 ID=FC921433; Name=FC921433; organism=Citrus clementina; type=EST; length=703bp
GGGAAAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAA
GCTGTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAA
GATTATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAG
GTAGGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGG
ATTGGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCG
GGAAAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAAC
AAATTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGA
GTTGAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGT
TGCTTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGC
CAGAGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCA
TCCACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAA
TGGACTTGCGAACCCTGGTAATATTGCTTCCTACGTGGTTGTTACTCACC
AACATAGTACCATTAGAAGAGCTGTTGACAGGTTGATATTCCTCTACGAG
GGTAAGATTGTTTGGCAGGNAATGACCCATGAATTCACATCATCATCCAA
TCC
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