FC921447

Overview
NameFC921447
Unique NameFC921447
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length743
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BURTA (Adenylate kinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=adk PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 96/185 (51.89%), Postives = 132/185 (71.35%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            RL+L+G PG+GKGTQ+  IK+++ +  ++TGDMLR+AV A TPLG++AK  MD+G+LV D L++G++ E +K+  C  G++ DGFPRT+ QA+ + E     G  ID VL   +  S + ER++GR  HPASGR+YH KF PPKV G DDVTGEPLIQR DD  + +K RL+ +  QT+P I YY
Sbjct:    2 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKAYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQADAMKE----AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLIQRDDDKEETVKKRLDVYEAQTKPLITYY 182          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BURS3 (Adenylate kinase OS=Burkholderia sp. (strain 383) GN=adk PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 97/185 (52.43%), Postives = 131/185 (70.81%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            RL+L+G PG+GKGTQ+  IK+++ +  ++TGDMLR+AV A TPLG++AK  MD G+LV D L++G++ E +K+  C  G++ DGFPRT+ QA+ + E     G  ID VL   +  S + ER++GR  HPASGR+YH KF PPKV G DDVTGEPLIQR DD  + +K RLE +  QT+P I YY
Sbjct:    2 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKGYMDAGKLVPDALIIGLVKERLKESDCANGYLFDGFPRTIAQADAMKE----AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGHDDVTGEPLIQRDDDKEETVKKRLEVYEAQTKPLITYY 182          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BURCJ (Adenylate kinase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=adk PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 97/185 (52.43%), Postives = 131/185 (70.81%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            RL+L+G PG+GKGTQ+  IK+++ +  ++TGDMLR+AV A TPLG++AK  MD G+LV D L++G++ E +K+  C  G++ DGFPRT+ QA+ + E     G  ID VL   +  S + ER++GR  HPASGR+YH KF PPKV G DDVTGEPLIQR DD  + +K RLE +  QT+P I YY
Sbjct:    2 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKGYMDAGKLVPDALIIGLVKERLKESDCANGYLFDGFPRTIAQADAMKE----AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGHDDVTGEPLIQRDDDKEETVKKRLEVYEAQTKPLITYY 182          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BURCH (Adenylate kinase OS=Burkholderia cenocepacia (strain HI2424) GN=adk PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 97/185 (52.43%), Postives = 131/185 (70.81%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            RL+L+G PG+GKGTQ+  IK+++ +  ++TGDMLR+AV A TPLG++AK  MD G+LV D L++G++ E +K+  C  G++ DGFPRT+ QA+ + E     G  ID VL   +  S + ER++GR  HPASGR+YH KF PPKV G DDVTGEPLIQR DD  + +K RLE +  QT+P I YY
Sbjct:    2 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKGYMDAGKLVPDALIIGLVKERLKESDCANGYLFDGFPRTIAQADAMKE----AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGHDDVTGEPLIQRDDDKEETVKKRLEVYEAQTKPLITYY 182          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BURCC (Adenylate kinase OS=Burkholderia cenocepacia (strain MC0-3) GN=adk PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 97/185 (52.43%), Postives = 131/185 (70.81%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            RL+L+G PG+GKGTQ+  IK+++ +  ++TGDMLR+AV A TPLG++AK  MD G+LV D L++G++ E +K+  C  G++ DGFPRT+ QA+ + E     G  ID VL   +  S + ER++GR  HPASGR+YH KF PPKV G DDVTGEPLIQR DD  + +K RLE +  QT+P I YY
Sbjct:    2 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKGYMDAGKLVPDALIIGLVKERLKESDCANGYLFDGFPRTIAQADAMKE----AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGHDDVTGEPLIQRDDDKEETVKKRLEVYEAQTKPLITYY 182          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BURCA (Adenylate kinase OS=Burkholderia cenocepacia (strain AU 1054) GN=adk PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 97/185 (52.43%), Postives = 131/185 (70.81%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            RL+L+G PG+GKGTQ+  IK+++ +  ++TGDMLR+AV A TPLG++AK  MD G+LV D L++G++ E +K+  C  G++ DGFPRT+ QA+ + E     G  ID VL   +  S + ER++GR  HPASGR+YH KF PPKV G DDVTGEPLIQR DD  + +K RLE +  QT+P I YY
Sbjct:    2 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKGYMDAGKLVPDALIIGLVKERLKESDCANGYLFDGFPRTIAQADAMKE----AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGHDDVTGEPLIQRDDDKEETVKKRLEVYEAQTKPLITYY 182          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BACSU (Adenylate kinase OS=Bacillus subtilis GN=adk PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 97/192 (50.52%), Postives = 133/192 (69.27%), Query Frame = 1
Query:  148 LVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYYAKKGVLAH 723
            LVL+G PG+GKGTQ   I ++Y + H++TGDM R+A+  +TPLG++AK  +DKGELV D++ +GI+ E + K  CE+GF+LDGFPRTV QAE L+E+LE+ G  ID V+N  +D  +L ER+TGR I    G +YH  F PPK  G  D  G  L QR DD  + +  RLE   KQT+P +D+Y++KG LA+
Sbjct:    3 LVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLAN 194          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_FRAP2 (Adenylate kinase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=adk PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.203e-50
Identity = 89/185 (48.11%), Postives = 132/185 (71.35%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            R++L+G PG+GKGTQ+ +I+D+Y + H++TGDM+R  + + + +G + K+ +D G+LVSD+ ++ I+ + + K  C+ GF+LDG PRT++QAE+LD    K G  ID ++   + D++L ERITGR +HPASGR+YHTKF PPKV G DD+TGE LI R DD    ++ RL  +H QT   ID+Y
Sbjct:    2 RIILLGAPGAGKGTQAKIIEDKYNIAHISTGDMIRETIKSDSEIGKELKKVLDAGQLVSDEFIIKIVKDRISKDDCKNGFLLDGVPRTIIQAEELD----KLGVNIDYIVEVDVKDNLLIERITGRRVHPASGRTYHTKFNPPKVEGKDDITGEDLITRTDDNEDTVRERLSVYHAQTSKLIDFY 182          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BURPS (Adenylate kinase OS=Burkholderia pseudomallei GN=adk PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.203e-50
Identity = 95/185 (51.35%), Postives = 132/185 (71.35%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            RL+L+G PG+GKGTQ+  IK+++ +  ++TGDMLR+AV A TPLG++AK  MD+G+LV D L++G++ E +K+  C  G++ DGFPRT+ QA+ + E     G  ID VL   +  S + ER++GR  HPASGR+YH KF PPKV G DDVTGEPL+QR DD  + +K RL+ +  QT+P I YY
Sbjct:    2 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQADAMKE----AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLVQRDDDKEETVKKRLDVYEAQTKPLITYY 182          
BLAST of FC921447 vs. ExPASy Swiss-Prot
Match: KAD_BURP6 (Adenylate kinase OS=Burkholderia pseudomallei (strain 668) GN=adk PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.203e-50
Identity = 95/185 (51.35%), Postives = 132/185 (71.35%), Query Frame = 1
Query:  145 RLVLIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRSAVAAKTPLGIKAKEAMDKGELVSDDLVVGIINEAMKKPSCEKGFILDGFPRTVVQAEKLDEMLEKQGAEIDKVLNFAIDDSILEERITGRWIHPASGRSYHTKFAPPKVYGFDDVTGEPLIQRKDDTAQVLKSRLEAFHKQTEPGIDYY 699
            RL+L+G PG+GKGTQ+  IK+++ +  ++TGDMLR+AV A TPLG++AK  MD+G+LV D L++G++ E +K+  C  G++ DGFPRT+ QA+ + E     G  ID VL   +  S + ER++GR  HPASGR+YH KF PPKV G DDVTGEPL+QR DD  + +K RL+ +  QT+P I YY
Sbjct:    2 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQADAMKE----AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLVQRDDDKEETVKKRLDVYEAQTKPLITYY 182          
The following BLAST results are available for this feature:
BLAST of FC921447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_BURTA9.215e-5151.89Adenylate kinase OS=Burkholderia thailandensis (st... [more]
KAD_BURS39.215e-5152.43Adenylate kinase OS=Burkholderia sp. (strain 383) ... [more]
KAD_BURCJ9.215e-5152.43Adenylate kinase OS=Burkholderia cepacia (strain J... [more]
KAD_BURCH9.215e-5152.43Adenylate kinase OS=Burkholderia cenocepacia (stra... [more]
KAD_BURCC9.215e-5152.43Adenylate kinase OS=Burkholderia cenocepacia (stra... [more]
KAD_BURCA9.215e-5152.43Adenylate kinase OS=Burkholderia cenocepacia (stra... [more]
KAD_BACSU9.215e-5150.52Adenylate kinase OS=Bacillus subtilis GN=adk PE=1 ... [more]
KAD_FRAP21.203e-5048.11Adenylate kinase OS=Francisella philomiragia subsp... [more]
KAD_BURPS1.203e-5051.35Adenylate kinase OS=Burkholderia pseudomallei GN=a... [more]
KAD_BURP61.203e-5051.35Adenylate kinase OS=Burkholderia pseudomallei (str... [more]

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Properties
Property NameValue
Genbank descriptionC32105A12EF RVDevelopN Citrus clementina cDNA clone C32105A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921447 ID=FC921447; Name=FC921447; organism=Citrus clementina; type=EST; length=743bp
GCACTACACAACAGGCGTTGAAAGTTTAAACAGAACAGAGAGAGCAAAAT
GGCGAGCTCTGCAGTGGCATTGGAGGATGTGCCTTCGGTTGATATGATGA
CGGAGCTACTCCGTCGCTTCAAGTGTTCTTCTAAGCCCGACAAGCGTCTC
GTTCTCATTGGTCCACCGGGATCTGGCAAGGGTACACAGTCACCAGTGAT
TAAGGACGAGTATTGCTTGTGCCATTTGGCCACCGGCGATATGCTTAGAT
CCGCTGTTGCTGCAAAAACCCCACTTGGGATTAAGGCAAAGGAAGCAATG
GATAAGGGAGAACTTGTCTCTGATGATTTGGTGGTTGGAATTATCAATGA
GGCGATGAAGAAACCTTCATGTGAAAAAGGATTTATTCTGGATGGGTTCC
CGAGGACTGTGGTACAAGCGGAAAAGCTGGATGAGATGCTGGAAAAGCAG
GGAGCCGAAATTGATAAAGTTCTCAACTTTGCAATTGATGATTCCATATT
GGAGGAGAGGATCACAGGTCGTTGGATACACCCTGCCAGTGGTCGGTCTT
ACCACACTAAATTTGCACCCCCCAAAGTTTATGGTTTTGATGATGTCACA
GGAGAGCCTCTAATACAGCGAAAAGATGATACTGCACAAGTTCTCAAGTC
ACGGCTGGAGGCATTTCACAAGCAGACTGAACCCGGTATTGATTATTATG
CCAAGAAAGGCGTTCTTGCCCACTTCATGCAGAAACCCACCAA
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