FC921481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAB (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 253 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYAD--AIPXWDNVVIAYEPVWAI 741 V GNWK +GT S+ +L+ L L ++I QV L + I++ AQNS V GA TGE + QL D+GC V++GHSERR ++GE D+ + +K A A S GL + C+GE EREAGKT +V +QL + D + + V+AYEPVWAI Sbjct: 6 VAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAI 172
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA8 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 253 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYAD--AIPXWDNVVIAYEPVWAI 741 V GNWK +GT S+ +L+ L L ++I QV L + I++ AQNS V GA TGE + QL D+GC V++GHSERR ++GE D+ + +K A A S GL + C+GE EREAGKT +V +QL + D + + V+AYEPVWAI Sbjct: 6 VAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAI 172
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28 Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 1 Query: 250 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXX-FVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAI--PXWDNVVIAYEPVWAI 741 F+ GNWK + T LV +L A + F + V +L I +AAQN + GAFTGE+S LKD GC++V++GHSERR + E D FI +K + GL I CIGE L+EREA KTFDV +Q++ + + + +V+AYEPVWAI Sbjct: 5 FIAGNWKLHKTSAEAAALVGELKGALSDVVDRDIVVAPVFTSLAAVIATLEKSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGETLEEREADKTFDVLERQVRCGLEGLDAAAMEQIVVAYEPVWAI 172
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_YERE8 (Triosephosphate isomerase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=tpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27 Identity = 69/167 (41.32%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 253 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAI--PXWDNVVIAYEPVWAI 741 V GNWK NG+ + +L+++L + +Y++Q K+ L+ RI + AQN V GAFTGE S E LKDIG +++++GHSERR E D+FI KK GL + CIGE E EAG+T VC +QL A + + ++ VIAYEP+WAI Sbjct: 6 VMGNWKLNGSTHMVNELIANLRKELSTVEGCGVAIAPPAIYLNQAKHELSGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDEFIAKKFGVLKEVGLTPVLCIGETEAENEAGQTEAVCAKQLDAVLNTLGAKAFEGAVIAYEPIWAI 172
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27 Identity = 65/165 (39.39%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 253 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADA--IPXWDNVVIAYEPVWAI 741 V GNWK NG K+ +T++ L A F Y+ ++++ + I +QN + GAFTGE+S L ++GC +V++GHSERR + GE D I K A+A + GL I C+GE L+ER++G T + QL+A DA + + N ++AYEPVWAI Sbjct: 7 VAGNWKMNGRKDLLTEMADAL--AGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAI 169
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_TREDE (Triosephosphate isomerase OS=Treponema denticola GN=tpiA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.189e-27 Identity = 69/169 (40.83%), Postives = 92/169 (54.44%), Query Frame = 1 Query: 244 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAI--PXWDNVVIAYEPVWAI 741 KF++ NWK N + +L +++ + F + V + L I + AQN + + GA TGE+SV QL D+G + V+LGHSERRH+ E D I KK AL GL VI C+GE L+EREAG VC +Q+K + D V IAYEPVWAI Sbjct: 3 KFYIAANWKMNMNRAEAKQLATEMKAGLKDGKNKYMIAPSFTLLQDVASVLKGSNILLGAQNMGLEEKGAHTGEVSVLQLLDVGVQAVILGHSERRHIYKETDDLINKKVKLALKHGLEVILCVGELLEEREAGHAEAVCERQIKKGLAEVSAKDLDKVTIAYEPVWAI 171
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA7 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain PA7) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.165e-27 Identity = 71/167 (42.51%), Postives = 94/167 (56.29%), Query Frame = 1 Query: 253 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYAD--AIPXWDNVVIAYEPVWAI 741 V GNWK +GT S+ L+ L L ++I QV L + I + AQNS V GA TGEI+ QL D GC V++GHSERR ++GE D+ + +K A A S GL + C+GE EREAGKT +V +QL + D + + V+AYEPVWAI Sbjct: 6 VAGNWKMHGTHSSVADLIKGLRQLALPSGVDVAVMPPCLFISQVVQGLAGKAIGVGAQNSAVEPMQGALTGEIAPSQLADAGCGMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAI 172
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_ENTCL (Triosephosphate isomerase OS=Enterobacter cloacae GN=tpiA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.165e-27 Identity = 71/167 (42.51%), Postives = 95/167 (56.89%), Query Frame = 1 Query: 253 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAY--ADAIPXWDNVVIAYEPVWAI 741 V GNWK NG++ + +LV++L + +Y+D K++ I + AQN V GAFTGE S E LKDIG K++++GHSERR E D+FI KK A +GL + CIGE E EAGKT +VC +Q+ A ++ VIAYEPVWAI Sbjct: 6 VMGNWKLNGSRHMVNELVANLRKELAGVTGCAVAIAPPDMYLDLAKHAADGSHIILGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFAVLKEQGLIPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAI 172
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.165e-27 Identity = 70/167 (41.92%), Postives = 95/167 (56.89%), Query Frame = 1 Query: 253 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAY--ADAIPXWDNVVIAYEPVWAI 741 V GNWK NG++ + +L+++L + +Y+D K++ I + AQN V GAFTGE S E LKDIG K++++GHSERR E D+ I KK A +GL + CIGE E EAGKT +VC +Q+ A ++ VVIAYEPVWAI Sbjct: 6 VMGNWKLNGSRHMVNELIANLRKELAGVTGCAVAIAPPDIYLDLAKHAADGSHIVLGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDELIAKKFAVLKEQGLIPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGASAFEGVVIAYEPVWAI 172
BLAST of FC921481 vs. ExPASy Swiss-Prot
Match: TPIS_MARAV (Triosephosphate isomerase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.440e-27 Identity = 65/167 (38.92%), Postives = 91/167 (54.49%), Query Frame = 1 Query: 253 VGGNWKCNGTKESITKLVSDLND--AKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--XWDNVVIAYEPVWAI 741 V GNWK NG+K+ + +LV + + + +Y+DQV RI AQN + GA+TGEIS E +D+GC +V++GHSERR + GE D K L GL + C+GE L EREA + V +Q+++ + W VV+AYEPVWAI Sbjct: 6 VAGNWKMNGSKDLVKQLVGAVREQSGSVGEDVEVVIIPPAIYLDQVAEQGGGRITTGAQNVSQWQSGAYTGEISAEMARDMGCGYVLVGHSERRQLFGETDSVAAAKVEQVLLSGLVAVLCVGETLAEREADQAEAVVAEQVRSGLSVVADGQWSRVVVAYEPVWAI 172 The following BLAST results are available for this feature:
BLAST of FC921481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921481 ID=FC921481; Name=FC921481; organism=Citrus clementina; type=EST; length=742bpback to top |