FC921493

Overview
NameFC921493
Unique NameFC921493
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_BACAN (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus anthracis GN=clpP2 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.136e-38
Identity = 76/125 (60.80%), Postives = 98/125 (78.40%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+  K  VSTIC+G+AASMGAFLLAAG KGKRY +PN+  MIHQPLG A G+AT++ I  + +
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEAMIHQPLGGAQGQATEIEIAAKRI 143          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_THIDA (ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.483e-38
Identity = 75/125 (60.00%), Postives = 101/125 (80.80%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++R+IFL   V+D TA+ I++Q+LFL++E+  KDI L+INSPGGSV+AG+ IYD M+  K DVST+C+G AASMGAFLL AG+KGKRYC+PN+RVMIHQPLG   G+A+D+ I  +E+
Sbjct:   33 DIYSRLLKERVIFLVGPVNDATANLIVAQMLFLESENPDKDIYLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEI 157          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBM (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.483e-38
Identity = 77/120 (64.17%), Postives = 95/120 (79.17%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 651
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L+INSPGGS+T+GM IYD M+  K DVSTIC+G+AASMGAFLL AG+KGKRY +PN+ VMIHQPLG   G+ATD+ I
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLVAGAKGKRYALPNSEVMIHQPLGGFQGQATDIGI 138          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_AZOSB (ATP-dependent Clp protease proteolytic subunit OS=Azoarcus sp. (strain BH72) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.483e-38
Identity = 75/125 (60.00%), Postives = 101/125 (80.80%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++R++FL   V+D+TA+ I++QLLFL++E+  KDI  +INSPGGSVTAG+ IYD M+  K +VST+C+G AASMGAFLLAAG KGKR+C+PN+RVMIHQPLG   G+A+D+ I  RE+
Sbjct:   35 DIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIYFYINSPGGSVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAREI 159          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ALKOO (ATP-dependent Clp protease proteolytic subunit OS=Alkaliphilus oremlandii (strain OhILAs) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.483e-38
Identity = 75/120 (62.50%), Postives = 95/120 (79.17%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 651
            D  + LL++RIIFL  +V+D TA  +++QLLFL++ED  KDI+L+INSPGGS+TAGM IYD M   K DVSTIC+G+AASMGAFLL AG KGKR+ +PNA +MIHQPLG   G+A D+ I
Sbjct:   19 DIYSRLLKERIIFLSDEVNDATASLVVAQLLFLESEDPDKDIQLYINSPGGSITAGMAIYDTMNYIKPDVSTICIGMAASMGAFLLTAGQKGKRFALPNAEIMIHQPLGGTRGQAEDIRI 138          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_YERPS (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pseudotuberculosis GN=clpP PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.937e-38
Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++RIIFL  QV+D  A+ I +Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+  K DVSTIC+G A SMGAFLL AG+KGKR+C+PN+RVMIHQPLG   G+ATD+ I  +E+
Sbjct:   32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEI 156          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_YERPP (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis (strain Pestoides F) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.937e-38
Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++RIIFL  QV+D  A+ I +Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+  K DVSTIC+G A SMGAFLL AG+KGKR+C+PN+RVMIHQPLG   G+ATD+ I  +E+
Sbjct:   32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEI 156          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_YERPN (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.937e-38
Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++RIIFL  QV+D  A+ I +Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+  K DVSTIC+G A SMGAFLL AG+KGKR+C+PN+RVMIHQPLG   G+ATD+ I  +E+
Sbjct:   32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEI 156          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_YERPE (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis GN=clpP PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.937e-38
Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++RIIFL  QV+D  A+ I +Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+  K DVSTIC+G A SMGAFLL AG+KGKR+C+PN+RVMIHQPLG   G+ATD+ I  +E+
Sbjct:   32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEI 156          
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_YERPA (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.937e-38
Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++RIIFL  QV+D  A+ I +Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+  K DVSTIC+G A SMGAFLL AG+KGKR+C+PN+RVMIHQPLG   G+ATD+ I  +E+
Sbjct:   32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEI 156          
The following BLAST results are available for this feature:
BLAST of FC921493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP2_BACAN1.136e-3860.80ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_THIDA1.483e-3860.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBM1.483e-3864.17ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AZOSB1.483e-3860.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ALKOO1.483e-3862.50ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_YERPS1.937e-3861.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_YERPP1.937e-3861.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_YERPN1.937e-3861.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_YERPE1.937e-3861.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_YERPA1.937e-3861.60ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionC32105F02EF RVDevelopN Citrus clementina cDNA clone C32105F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921493 ID=FC921493; Name=FC921493; organism=Citrus clementina; type=EST; length=667bp
GAAACCACCCAGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGAC
AGCATCTTCATTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGA
AAACCCACTTTCTCACTGCCGCTAATAACACTAACACTAGCACTACAATC
AAAACGAGGAGACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAAT
AGCACAGACCTTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATA
ATAATACTTCATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACT
AACATGCTTCTCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGA
CTTGACTGCTGATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAG
ATTCTAAAAAAGATATCAGGTTGTTTATTAATTCACCTGGTGGCTCTGTT
ACTGCTGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGT
TTCAACTATTTGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAG
CAGCTGGTTCAAAAGGGAAGAGATATTGCATGCCTAATGCAAGAGTAATG
ATCCATCAACCTCTTGGGACTGCTGGAGGCAAAGCAACAGATATGAGCAT
ACGGATTAGAGAGATGT
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