FC921493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_SALNS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella newport (strain SL254) GN=clpP PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_SALHS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella heidelberg (strain SL476) GN=clpP PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_SALEP (ATP-dependent Clp protease proteolytic subunit OS=Salmonella enteritidis PT4 (strain P125109) GN=clpP PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_SALCH (ATP-dependent Clp protease proteolytic subunit OS=Salmonella choleraesuis GN=clpP PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ECOUT (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain UTI89 / UPEC) GN=clpP PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ECOLI (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain K12) GN=clpP PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ECOLC (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=clpP PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ECOL6 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O6 GN=clpP PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ECOL5 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=clpP PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ECOK1 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O1:K1 / APEC GN=clpP PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 The following BLAST results are available for this feature:
BLAST of FC921493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921493 ID=FC921493; Name=FC921493; organism=Citrus clementina; type=EST; length=667bpback to top |