FC921493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_LEIXX (ATP-dependent Clp protease proteolytic subunit 1 OS=Leifsonia xyli subsp. xyli GN=clpP1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.030e-31 Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 1 Query: 307 LLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDM 645 LL+ RII+LGS+V D A+ I ++LL L AEDSK+DI L+INSPGGS+TAGM IYD M+ D+ T+ +G+AASMG LL AG+KGKRY PNARV++HQP G GG A+D+ Sbjct: 14 LLKDRIIWLGSEVRDENANEIAAKLLLLAAEDSKRDIYLYINSPGGSITAGMAIYDTMQFVPNDIVTVGIGMAASMGQLLLTAGTKGKRYITPNARVLLHQPHGGFGGTASDI 126
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_LACBA (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=clpP PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31 Identity = 67/125 (53.60%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII L ++D A+ II+QLLFLDA+DS KDI L+INSPGG V++G+ IYD M ++DV TI LG+AASM + L ++G+KGKR+ +P+A+VMIHQP G A G+ T++ I RE+ Sbjct: 19 DIYSRLLKDRIIMLSGPIEDDMANAIIAQLLFLDAQDSTKDISLYINSPGGVVSSGLAIYDTMNFIQSDVQTITLGMAASMASVLASSGTKGKRFALPHAQVMIHQPSGGAQGQQTEIEIAAREI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_CAUCR (ATP-dependent Clp protease proteolytic subunit OS=Caulobacter crescentus GN=clpP PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31 Identity = 65/118 (55.08%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDM 645 D + LL++RIIFL V+D A I +QLLFL++E+ KK+I ++INSPGG VTAG+ IYD M+ K+ VST+C+G+AASMG+ LLAAG+ G+R +PNAR+M+HQP G G+A+D+ Sbjct: 27 DIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRISLPNARIMVHQPSGGFRGQASDI 144
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_CAUCN (ATP-dependent Clp protease proteolytic subunit OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=clpP PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31 Identity = 65/118 (55.08%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDM 645 D + LL++RIIFL V+D A I +QLLFL++E+ KK+I ++INSPGG VTAG+ IYD M+ K+ VST+C+G+AASMG+ LLAAG+ G+R +PNAR+M+HQP G G+A+D+ Sbjct: 27 DIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRISLPNARIMVHQPSGGFRGQASDI 144
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_LACRJ (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus reuteri (strain JCM 1112) GN=clpP PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31 Identity = 66/125 (52.80%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII L ++D A+ I++QLLFLDA+DS KDI L+INSPGG VT+GM IYD M KADV TI +G+AASM + L+++G+KGKR+ +P+++V+IHQP G A G+ T++ I E+ Sbjct: 19 DIYSRLLKDRIIMLSGPIEDEMANSIVAQLLFLDAQDSTKDIYLYINSPGGVVTSGMAIYDTMNFIKADVQTIVIGMAASMASVLVSSGAKGKRFGLPHSQVLIHQPSGGAQGQQTEIEIAATEI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_LACRD (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus reuteri (strain DSM 20016) GN=clpP PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31 Identity = 66/125 (52.80%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII L ++D A+ I++QLLFLDA+DS KDI L+INSPGG VT+GM IYD M KADV TI +G+AASM + L+++G+KGKR+ +P+++V+IHQP G A G+ T++ I E+ Sbjct: 19 DIYSRLLKDRIIMLSGPIEDEMANSIVAQLLFLDAQDSTKDIYLYINSPGGVVTSGMAIYDTMNFIKADVQTIVIGMAASMASVLVSSGAKGKRFGLPHSQVLIHQPSGGAQGQQTEIEIAATEI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_LACPL (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus plantarum GN=clpP PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31 Identity = 66/125 (52.80%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII L ++D A+ II+QLLFLDA+DS KDI L+INSPGG VTAG+ IYD M K+DV TI +G+AASM + L ++G+KGKR+ +PN+ ++IHQP G A G+ T++ I E+ Sbjct: 19 DIYSRLLKDRIIMLSGPIEDNMANAIIAQLLFLDAQDSGKDIYLYINSPGGVVTAGLAIYDTMNFIKSDVQTIVMGMAASMASVLASSGTKGKRFALPNSEILIHQPSGGAQGQQTEIEIVAEEI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_LACCB (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus casei (strain BL23) GN=clpP PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31 Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII L +V+D A+ +I+QLLFLDA+DS+KDI L+INSPGG +T+G+ + D M K+DV TI +G+AASM + LLA G+KGKR+ +PN+ ++IHQP G A G+ T++ I E+ Sbjct: 18 DIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVITSGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQQTEIEIAAEEI 142
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_LACC3 (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus casei (strain ATCC 334) GN=clpP PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31 Identity = 64/125 (51.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII L +V+D A+ +I+QLLFLDA+DS+KDI L+INSPGG +T+G+ + D M K+DV TI +G+AASM + LLA G+KGKR+ +PN+ ++IHQP G A G+ T++ I E+ Sbjct: 18 DIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVITSGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQQTEIEIAAEEI 142
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_BARQU (ATP-dependent Clp protease proteolytic subunit OS=Bartonella quintana GN=clpP PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31 Identity = 64/118 (54.24%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDM 645 D + LL++RIIF+ V+D A + +QLLFL+AE+ KK+I L+INSPGG VT+GM IYD M+ + VST+C+G AASMG+ LL AG+KG R+ +PNAR+M+HQP G G+A+D+ Sbjct: 27 DIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNARIMVHQPSGGFQGQASDI 144 The following BLAST results are available for this feature:
BLAST of FC921493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921493 ID=FC921493; Name=FC921493; organism=Citrus clementina; type=EST; length=667bpback to top |