FC921493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_MACCJ (ATP-dependent Clp protease proteolytic subunit OS=Macrococcus caseolyticus (strain JCSC5402) GN=clpP PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39 Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII LGS +DD A+ I+SQLLFL A+D++KDI L+INSPGGSVTAGM IYD M+ K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I R + Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAARHI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSW (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus sp. (strain WCH70) GN=clpP PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39 Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII LGS +DD A+ I+SQLLFL AED +KDI L+INSPGGS+TAG+ IYD M+ K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG A G+AT++ I + + Sbjct: 19 DIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAAKRI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39 Identity = 80/125 (64.00%), Postives = 102/125 (81.60%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LLR RIIFLG+QVDD A+ I++Q+L+L++ED +KDI L+INSPGGSV AGM IYD M+ + DVSTIC+GLAASMGAFLLA G+KGKR +P+AR+MIHQPLG A G ATD+ I+ +E+ Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEI 141
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39 Identity = 80/125 (64.00%), Postives = 102/125 (81.60%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LLR RIIFLG+QVDD A+ I++Q+L+L++ED +KDI L+INSPGGSV AGM IYD M+ + DVSTIC+GLAASMGAFLLA G+KGKR +P+AR+MIHQPLG A G ATD+ I+ +E+ Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEI 141
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_BURXL (ATP-dependent Clp protease proteolytic subunit 2 OS=Burkholderia xenovorans (strain LB400) GN=clpP2 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39 Identity = 76/125 (60.80%), Postives = 104/125 (83.20%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++RI+FL +V+D TA+ +++Q+LFL++E+ KDI +INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLAAG+KGKR+ +PN+RVMIHQPLG A G+A+D+ I+ RE+ Sbjct: 42 DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREI 166
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNY3 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpP1 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39 Identity = 77/125 (61.60%), Postives = 103/125 (82.40%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LLR+RI+FLG +V D A+ +++QLLFL+AED +KDI L+INSPGGSV+AG+GI+D M + DV TIC+GLAASMGAFLL+AG+KGKR +PN+R+MIHQPLG A G+ATD+ I+ +E+ Sbjct: 17 DIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATDIEIQAKEI 141
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39 Identity = 78/125 (62.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LLR+RIIFLG+ VDD AD +++Q+LFL+AED +KDI+++INSPGGSVTAG+ IYD M+ DV TIC GLAASMGAFLL+ G+KGKR +PNAR+MIHQPLG A G+A D+ I+ +E+ Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEI 148
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_SODGM (ATP-dependent Clp protease proteolytic subunit OS=Sodalis glossinidius (strain morsitans) GN=clpP PE=3 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.289e-39 Identity = 77/125 (61.60%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++RIIF+ QV+D A+ I++Q++FL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVST C+G AASMGAFLLAAG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ Sbjct: 19 DIFSRLLKERIIFMTGQVEDHMANLIVAQMMFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTFCMGQAASMGAFLLAAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAREI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_RALSO (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia solanacearum GN=clpP PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.289e-39 Identity = 74/125 (59.20%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IF+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AG+ +YD M+ K DVST+C+G+AASMGAFLLAAG+KGKRY +PN+R+MIHQPLG A G+A+D+ I+ RE+ Sbjct: 41 DIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEIQAREI 165
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_BURVG (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.289e-39 Identity = 75/125 (60.00%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R++F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKR+ +PN+RVMIHQPLG A G+A+D+ I+ RE+ Sbjct: 42 DIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREI 166 The following BLAST results are available for this feature:
BLAST of FC921493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921493 ID=FC921493; Name=FC921493; organism=Citrus clementina; type=EST; length=667bpback to top |