FC921493

Overview
NameFC921493
Unique NameFC921493
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39
Identity = 73/125 (58.40%), Postives = 104/125 (83.20%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL+ RI+F+GS +DD TA+ +I+QLLFL++ED  KDI  +INSPGG V+AGM IYD M+  K+D++T+C+G AASMGAFLLAAG+KGKR+ +PN+R+MIHQP+G A G+A+D++I+ +E+
Sbjct:   19 DIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEI 143
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ANOFW (ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39
Identity = 78/125 (62.40%), Postives = 99/125 (79.20%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL+ RII LGS +DD  A+ I+SQLLFL AED +KDI L+INSPGGS+TAGM IYD M+  K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG   G+AT++ I  + +
Sbjct:   19 DIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATEIEIAAKRI 143
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNPX (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39
Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LLR+RIIFLG+ VDD  AD +++Q+LFL+AED +KDI+++INSPGGSVTAG+ IYD M+    DV TIC GLAASMGAFLL+ G KGKR  +PNAR+MIHQPLG A G+A D+ I+ +E+
Sbjct:   41 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEI 165
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMM (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39
Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LLR+RIIFLG+ VDD  AD +++Q+LFL+AED +KDI+++INSPGGSVTAG+ IYD M+    DV TIC GLAASMGAFLL  G+KGKR  +PNAR+MIHQPLG A G+A D+ I+ +E+
Sbjct:   41 DIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEI 165
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_PSEMY (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas mendocina (strain ymp) GN=clpP PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 78/125 (62.40%), Postives = 99/125 (79.20%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++R+IFL  QV+D  A+ I +QLLFL+AE+  KDI L+INSPGGSVTAGM IYD M+  KADVST C+G A SMGAFLLA G+KGKR+C+PN+RVMIHQPLG   G+A+D+ I  +E+
Sbjct:   35 DIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEI 159
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_COLP3 (ATP-dependent Clp protease proteolytic subunit OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=clpP PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 78/125 (62.40%), Postives = 98/125 (78.40%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL++R+IFL  QV+D  A+ II+QLLFL++E   KDI L+INSPGGSVTAGM IYD MK  K ++ST+C+G AASMGAFLL+ G KGKRYC+PNARVMIHQPLG   G+A+D  I  +E+
Sbjct:   43 DIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIYLYINSPGGSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEI 167
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpP PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 75/125 (60.00%), Postives = 100/125 (80.00%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL+ RII L  +++D+TA  +++Q+LFL+AED  KDI+L+INSPGGSVTAG  IYD M+  K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG A G+ATD+ I   ++
Sbjct:   19 DIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQLYINSPGGSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGARGQATDIKIHAEQI 143
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus thuringiensis subsp. konkukian GN=clpP2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+  K  VSTIC+G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I  + +
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRI 143
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_BACCZ (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus (strain ZK / E33L) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+  K  VSTIC+G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I  + +
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRI 143
[Close]
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_BACCR (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1 
Query:  292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+  K  VSTIC+G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I  + +
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRI 143
The following BLAST results are available for this feature:
BLAST of FC921493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_DESOH2.989e-3958.40ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANOFW2.989e-3962.40ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_SYNPX2.989e-3962.40ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_PROMM2.989e-3962.40ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_PSEMY3.904e-3962.40ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_COLP33.904e-3962.40ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOTH3.904e-3960.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_BACHK3.904e-3961.60ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_BACCZ3.904e-3961.60ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_BACCR3.904e-3961.60ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionC32105F02EF RVDevelopN Citrus clementina cDNA clone C32105F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921493 ID=FC921493; Name=FC921493; organism=Citrus clementina; type=EST; length=667bp
GAAACCACCCAGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGAC
AGCATCTTCATTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGA
AAACCCACTTTCTCACTGCCGCTAATAACACTAACACTAGCACTACAATC
AAAACGAGGAGACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAAT
AGCACAGACCTTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATA
ATAATACTTCATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACT
AACATGCTTCTCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGA
CTTGACTGCTGATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAG
ATTCTAAAAAAGATATCAGGTTGTTTATTAATTCACCTGGTGGCTCTGTT
ACTGCTGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGT
TTCAACTATTTGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAG
CAGCTGGTTCAAAAGGGAAGAGATATTGCATGCCTAATGCAAGAGTAATG
ATCCATCAACCTCTTGGGACTGCTGGAGGCAAAGCAACAGATATGAGCAT
ACGGATTAGAGAGATGT
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