FC921493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39 Identity = 73/125 (58.40%), Postives = 104/125 (83.20%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RI+F+GS +DD TA+ +I+QLLFL++ED KDI +INSPGG V+AGM IYD M+ K+D++T+C+G AASMGAFLLAAG+KGKR+ +PN+R+MIHQP+G A G+A+D++I+ +E+ Sbjct: 19 DIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_ANOFW (ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39 Identity = 78/125 (62.40%), Postives = 99/125 (79.20%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII LGS +DD A+ I+SQLLFL AED +KDI L+INSPGGS+TAGM IYD M+ K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG G+AT++ I + + Sbjct: 19 DIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATEIEIAAKRI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNPX (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) GN=clpP1 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39 Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LLR+RIIFLG+ VDD AD +++Q+LFL+AED +KDI+++INSPGGSVTAG+ IYD M+ DV TIC GLAASMGAFLL+ G KGKR +PNAR+MIHQPLG A G+A D+ I+ +E+ Sbjct: 41 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEI 165
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMM (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP1 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39 Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LLR+RIIFLG+ VDD AD +++Q+LFL+AED +KDI+++INSPGGSVTAG+ IYD M+ DV TIC GLAASMGAFLL G+KGKR +PNAR+MIHQPLG A G+A D+ I+ +E+ Sbjct: 41 DIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEI 165
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_PSEMY (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas mendocina (strain ymp) GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39 Identity = 78/125 (62.40%), Postives = 99/125 (79.20%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ I +QLLFL+AE+ KDI L+INSPGGSVTAGM IYD M+ KADVST C+G A SMGAFLLA G+KGKR+C+PN+RVMIHQPLG G+A+D+ I +E+ Sbjct: 35 DIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEI 159
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_COLP3 (ATP-dependent Clp protease proteolytic subunit OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39 Identity = 78/125 (62.40%), Postives = 98/125 (78.40%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL++R+IFL QV+D A+ II+QLLFL++E KDI L+INSPGGSVTAGM IYD MK K ++ST+C+G AASMGAFLL+ G KGKRYC+PNARVMIHQPLG G+A+D I +E+ Sbjct: 43 DIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIYLYINSPGGSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEI 167
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39 Identity = 75/125 (60.00%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII L +++D+TA +++Q+LFL+AED KDI+L+INSPGGSVTAG IYD M+ K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG A G+ATD+ I ++ Sbjct: 19 DIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQLYINSPGGSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGARGQATDIKIHAEQI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus thuringiensis subsp. konkukian GN=clpP2 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39 Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII LGS +DD A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+ K VSTIC+G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I + + Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_BACCZ (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus (strain ZK / E33L) GN=clpP2 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39 Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII LGS +DD A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+ K VSTIC+G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I + + Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRI 143
BLAST of FC921493 vs. ExPASy Swiss-Prot
Match: CLPP2_BACCR (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpP2 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39 Identity = 77/125 (61.60%), Postives = 99/125 (79.20%), Query Frame = 1 Query: 292 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREM 666 D + LL+ RII LGS +DD A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+ K VSTIC+G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I + + Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRI 143 The following BLAST results are available for this feature:
BLAST of FC921493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921493 ID=FC921493; Name=FC921493; organism=Citrus clementina; type=EST; length=667bpback to top |