FC921666

Overview
NameFC921666
Unique NameFC921666
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBK (Chaperone protein dnaK OS=Clostridium botulinum (strain Okra / Type B1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 139/209 (66.51%), Postives = 170/209 (81.34%), Query Frame = 3
Query:   84 QFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++  ++ISA VL+KL  DA  +L + VT+AV+ VPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AEKAK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++
Sbjct:   85 EYTPQQISAMVLQKLKADAEAYLGEKVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIK 293          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBJ (Chaperone protein dnaK OS=Clostridium botulinum (strain Kyoto / Type A2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 139/209 (66.51%), Postives = 170/209 (81.34%), Query Frame = 3
Query:   84 QFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++  ++ISA VL+KL  DA  +L + VT+AV+ VPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AEKAK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++
Sbjct:   85 EYTPQQISAMVLQKLKADAEAYLGEKVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIK 293          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBH (Chaperone protein dnaK OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 139/209 (66.51%), Postives = 170/209 (81.34%), Query Frame = 3
Query:   84 QFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++  ++ISA VL+KL  DA  +L + VT+AV+ VPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AEKAK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++
Sbjct:   85 EYTPQQISAMVLQKLKADAEAYLGEKVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIK 293          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB6 (Chaperone protein dnaK OS=Clostridium botulinum (strain 657 / Type Ba4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 139/209 (66.51%), Postives = 170/209 (81.34%), Query Frame = 3
Query:   84 QFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++  ++ISA VL+KL  DA  +L + VT+AV+ VPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AEKAK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++
Sbjct:   85 EYTPQQISAMVLQKLKADAEAYLGEKVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIK 293          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB1 (Chaperone protein dnaK OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 139/209 (66.51%), Postives = 170/209 (81.34%), Query Frame = 3
Query:   84 QFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++  ++ISA VL+KL  DA  +L + VT+AV+ VPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AEKAK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++
Sbjct:   85 EYTPQQISAMVLQKLKADAEAYLGEKVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIK 293          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPB (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain BS1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74
Identity = 139/208 (66.83%), Postives = 166/208 (79.81%), Query Frame = 3
Query:   81 KQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTP 701
            K ++ +EISA +L+K+   A  FL + VT+AV+ VPAYFND+QR ATKDAG+IAGL+V RIINEPTAASL+YG + KN NE + VFDLGGGTFD+S+LE+GDGVFEV ST GDTHLGGDDFD++I+D+LA  FK+ EGIDL  D  ALQRL E AEKAK+ELSS T T I+LPFITAT +GPKH+   LTR KFE LCSDL D L  P
Sbjct:  105 KTYSPQEISAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIINEPTAASLSYGLDTKNENEKVAVFDLGGGTFDISILELGDGVFEVKSTDGDTHLGGDDFDQKIIDFLADEFKKQEGIDLRNDMMALQRLKEAAEKAKVELSSRTDTEINLPFITATQEGPKHLVVNLTRSKFEALCSDLFDSLIAP 312          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_THET2 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaK PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.450e-74
Identity = 141/212 (66.51%), Postives = 169/212 (79.72%), Query Frame = 3
Query:   78 GKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFIT--ATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            GK +  EEISA +LRKLV+DASK L + +TKAV+ VPAYFN++QR AT +AGRIAGL+VLRIINEPTAA+LAYG +KK NET+LVFDLGGGTFDV+VLE+G+GVFEV +TSGDTHLGG D D  IV+WLA  FK++ G+DL  D+QALQRL E AEKAK+ELSS  +T ISLPFI     +  P H++  LTR KFEEL   LL RL+ PVE
Sbjct:  104 GKLYTPEEISAMILRKLVEDASKKLGEKITKAVITVPAYFNNAQREATANAGRIAGLEVLRIINEPTAAALAYGLDKKGNETVLVFDLGGGTFDVTVLEIGEGVFEVKATSGDTHLGGSDMDHAIVNWLAEEFKKEHGVDLKADRQALQRLIEAAEKAKIELSSTLETTISLPFIALDPASKTPLHLEKKLTRAKFEELIQPLLKRLRGPVE 315          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_THET8 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaK PE=2 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 1.893e-74
Identity = 140/212 (66.04%), Postives = 169/212 (79.72%), Query Frame = 3
Query:   78 GKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFIT--ATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            GK +  EEISA +LRKLV+DASK L + +TKAV+ VPAYFN++QR AT +AGRIAGL+VLRIINEPTAA+LAYG +KK NET+LVFDLGGGTFDV++LE+G+GVFEV +TSGDTHLGG D D  IV+WLA  FK++ G+DL  D+QALQRL E AEKAK+ELSS  +T ISLPFI     +  P H++  LTR KFEEL   LL RL+ PVE
Sbjct:  104 GKLYTPEEISAMILRKLVEDASKKLGEKITKAVITVPAYFNNAQREATANAGRIAGLEVLRIINEPTAAALAYGLDKKGNETVLVFDLGGGTFDVTILEIGEGVFEVKATSGDTHLGGSDMDHAIVNWLAEEFKKEHGVDLKADRQALQRLIEAAEKAKIELSSTLETTISLPFIALDPASKTPLHLEKKLTRAKFEELIQPLLKRLRGPVE 315          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSF (Chaperone protein dnaK OS=Geobacter sp. (strain FRC-32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.473e-74
Identity = 133/211 (63.03%), Postives = 172/211 (81.52%), Query Frame = 3
Query:   78 GKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVET 710
            G++++  EISA VL+K+   A  +L ++VT AV+ VPAYF+DSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK +E I VFDLGGGTFD+S+LE+G+GVFEV ST+GDT LGG+DFD+ ++DW+A  FK+D+GIDL  DK ALQRL E AEKAK ELSS  +T+I+LPFITA A GPKH++  LTR K E +C++L+D+L+ P  T
Sbjct:  107 GQKYSPPEISAMVLQKMKKTAEDYLGETVTDAVITVPAYFDDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKKDEKIAVFDLGGGTFDISILELGEGVFEVKSTNGDTFLGGEDFDQNVIDWIADEFKKDQGIDLRNDKMALQRLKEAAEKAKCELSSSMETDINLPFITADASGPKHLNLKLTRAKLEAICANLIDKLEGPCRT 317          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_TREDE (Chaperone protein dnaK OS=Treponema denticola GN=dnaK PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.229e-74
Identity = 135/210 (64.29%), Postives = 170/210 (80.95%), Query Frame = 3
Query:   78 GKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTP 701
            GK ++ +EISA +L+K+   A  +L ++VT+AV+ VPAYFND+QR ATKDAG+IAGL+V RIINEPTAASLA+GF K  K  +TI V+DLGGGTFD+S+LE+GDGVFEV ST+GDTHLGGDDFD RIV+WL   FK+D GIDL KD+ ALQRL E AEKAK+ELSS+  T ++LPFITA A+GPKH+  +L+R KFE++  DL +R K P
Sbjct:  104 GKLYSTQEISAFILQKMKKTAEDYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIINEPTAASLAFGFNKDSKKEKTIAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDDFDNRIVNWLVDEFKKDTGIDLSKDRMALQRLREAAEKAKIELSSVANTEVNLPFITADANGPKHLQKSLSRAKFEQMTEDLFERTKEP 313          
The following BLAST results are available for this feature:
BLAST of FC921666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOBK1.110e-7466.51Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBJ1.110e-7466.51Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBH1.110e-7466.51Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOB61.110e-7466.51Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOB11.110e-7466.51Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CHLPB1.110e-7466.83Chaperone protein dnaK OS=Chlorobium phaeobacteroi... [more]
DNAK_THET21.450e-7466.51Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_THET81.893e-7466.04Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_GEOSF2.473e-7463.03Chaperone protein dnaK OS=Geobacter sp. (strain FR... [more]
DNAK_TREDE3.229e-7464.29Chaperone protein dnaK OS=Treponema denticola GN=d... [more]

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Properties
Property NameValue
Genbank descriptionC32107H10EF RVDevelopN Citrus clementina cDNA clone C32107H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921666 ID=FC921666; Name=FC921666; organism=Citrus clementina; type=EST; length=711bp
GATGAGGAATCGAAGCAGGTTTCGTATAGAGTTGTGAGAGATGAGAATGG
GAATGTGAAGTTGGCTGTCCTGCTATCGGCAAGCAGTTTGCTGCTGAAGA
GATTTCGGCCCAGGTCTTGAGAAAGCTTGTCGATGATGCGTCCAAGTTCT
TAAATGATAGTGTGACTAAAGCAGTGGTCGCAGTGCCTGCTTACTTCAAT
GATTCCCAGAGAACAGCAACAAAGGATGCTGGTCGAATTGCTGGCTTAGA
TGTTCTGCGTATAATTAATGAGCCTACTGCTGCTTCGTTGGCATATGGAT
TTGAAAAGAAAAACAACGAGACCATCCTAGTGTTTGACCTTGGTGGTGGT
ACTTTTGATGTTTCAGTCCTTGAGGTCGGTGATGGAGTGTTTGAAGTGCT
CTCCACCTCAGGCGATACGCATTTGGGTGGTGATGATTTTGATAAGAGGA
TTGTTGATTGGCTTGCTTCAAACTTCAAGAGAGATGAAGGCATAGATCTT
TTGAAGGACAAACAAGCTCTTCAGCGTCTAACTGAGACGGCTGAGAAGGC
TAAGATGGAGCTGTCATCTTTGACTCAAACAAACATCAGCTTGCCTTTCA
TTACTGCTACTGCAGATGGGCCGAAGCATATTGACACCACCCTTACGAGG
GTTAAGTTTGAGGAATTGTGTTCAGACCTACTGGACAGGCTCAAGACGCC
TGTTGAAACTT
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