FC921671

Overview
NameFC921671
Unique NameFC921671
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK2_YEAST (Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=PYK2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 51/183 (27.87%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKL----CAVMLDTIGPELLV-VTKTEHPISLLADESVVLTPDQDKEATSN--LLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            T I+GT+GP++ S E I+    AG+++ R +FS G   +HQ  +EN   A+KS ++      A+ LDT GPE+    T  +  + +  D  ++ T D     TSN  ++ I+++ L+K +  G  I++   + +       +L++  +D  ++  Q  NS  +A     +++    +DLP L+
Sbjct:   23 TSIIGTIGPKTNSCEAITALRKAGLNIIRLNFSHGSYEFHQSVIEN---AVKSEQQFPGRPLAIALDTKGPEIRTGRTLNDQDLYIPVDHQMIFTTDASFANTSNDKIMYIDYANLTKVIVPGRFIYVDDGILSFK-----VLQI--IDESNLRVQAVNSGYIASH-KGVNLPNTDVDLPPLS 194          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 49/178 (27.53%), Postives = 92/178 (51.69%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVT--DVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            TKIV T+GP S S E++   + AGM+VAR +FS G+ A H+  +++++   +   K+  ++LDT GPE+   +     + L+  + + ++  Q  E  +++  +++  L + V +G  I +   L        + LEVT  DV    +   I NS  L+     +++  + + LP +T
Sbjct:    4 TKIVCTIGPASESPELLEQLIEAGMNVARLNFSHGNHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGKLELVTGQKIDISMTQ-VEGNNDVFSVSYDKLIEDVNEGSVILLDDGL--------IQLEVTGKDVARGLIHTLIINSGSLSNN-KGVNIPGVSVQLPGMT 171          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYR_CANFA (Pyruvate kinase isozyme R (Fragment) OS=Canis familiaris GN=PKLR PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 53/187 (28.34%), Postives = 96/187 (51.34%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKS--TKKL----CAVMLDTIGPEL---LVVTKTEHPISLLADESVVLTPDQDKE--ATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            T I+ T+GP S SVE +   + AGM++AR +FS G   YH +++ N++ A++S  T  L     A+ LDT GPE+   ++    E  + L+    V++T D        ++ + +++  + K V  G  IFI   L        + L+V  +D + +  Q++N  +L  +   +++    +DLP L+
Sbjct:   33 TSIIATIGPASHSVERLKEMIKAGMNIARLNFSHGSHEYHAQSIANIREAVESFATSPLGYRPVAIALDTKGPEIRTGVLKGGPETEVELVKGSWVLVTVDPAFRTLGDAHTVWVDYPNIVKVVPVGGRIFIDDGL--------ISLQVKKIDRKGLETQVENGGLLGSR-KGVNLPGAEVDLPGLS 210          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK_SCHPO (Pyruvate kinase OS=Schizosaccharomyces pombe GN=pyk1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 48/183 (26.23%), Postives = 98/183 (53.55%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKL--CAVMLDTIGPEL---LVVTKTEHPISLLADESVVLTPDQ--DKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            T I+ T+GP+S +VE +    +AGM++ R +FS G   YHQ  ++N + A  +T  L   A+ LDT GPE+   L V  T++PIS  +   ++ T D    ++    ++ I++  ++K ++ G  I++   + +          +  VD +++  ++ N+  ++ +   +++ +  +DLP L+
Sbjct:   28 TSIICTIGPKSNNVETLCKLRDAGMNIVRMNFSHGSYEYHQSVIDNARKA-SATNPLFPLAIALDTKGPEIRTGLTVGGTDYPIS--SGHEMIFTTDDAYAEKCNDKVMYIDYKNITKVIQPGRIIYVDDGILS-------FTVIEKVDDKNLKVRVNNNGKISSK-KGVNLPKTDVDLPALS 199          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK_LEIME (Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 50/178 (28.09%), Postives = 90/178 (50.56%), Query Frame = 2
Query:  164 KIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQ--DKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVV-CQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            +I+ T+GP ++SVE + G + +GMSVAR +FS G   YHQ T+ N++ A        A+ LDT GPE+           +    +  +T D     + T +   I++  LSK V+ G+ I+I   +        ++L+V   + E  + C + NS  ++ +   +++    +DLP ++
Sbjct:   23 RIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFVGGDAVMERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGI--------LILQVQSHEDEQTLECTVTNSHTISDR-RGVNLPGCDVDLPAVS 191          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 49/187 (26.20%), Postives = 95/187 (50.80%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKS------TKKLCAVMLDTIGPEL---LVVTKTEHPISLLADESVVLT--PDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            T I+ T+GP SRSV+ +   + AGM++AR +FS G   YH E++ N++ A +S      + +  A+ LDT GPE+   ++    E  + ++    V++T  P       +  + +++  +++ V  G  I+I   L        + L V  +  E +V ++++  IL  +   +++    +DLP L+
Sbjct:   88 TSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREATESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFQTRGDAKTVWVDYHNITRVVAVGGRIYIDDGL--------ISLVVQKIGPEGLVTEVEHGGILGSR-KGVNLPNTEVDLPGLS 265          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 51/187 (27.27%), Postives = 94/187 (50.27%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKS------TKKLCAVMLDTIGPEL---LVVTKTEHPISLLADESVVLTPDQD--KEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            T I+ T+GP SRSVE +   + +GM+VAR +FS G   YH ET++N++ A +S        +  AV LDT GPE+   L+       + L    ++ +T D    ++   N+L +++  + K V  G  +++   L        + L+V     + +V +++N   L  +   +++    +DLP ++
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGL--------ISLQVKQKGPDFLVTEVENGGFLGSK-KGVNLPGAAVDLPAVS 222          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK_MYCIT (Pyruvate kinase OS=Mycobacterium intracellulare GN=pyk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 2
Query:  164 KIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQI 610
            KIV TLGP + S E+I   + AGM VAR +FS GD A H+   E +++A  +T +   V+ D  GP++ +      P +  AD   V     D E + + +   +  L++    GD + +        +   V L V  ++G+DV+C +
Sbjct:    6 KIVCTLGPATNSDELILALVEAGMDVARLNFSHGDYADHKAAYERVRVASDATGRAVGVLADLQGPKIRLGRFATGP-TYWADGETVRITVADCEGSHDRVSTTYKKLAEDAAVGDRVLV--------DDGKVCLVVDGIEGDDVICTV 145          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 51/178 (28.65%), Postives = 87/178 (48.88%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGE--DVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            TKIV T+GP S S E++   + AGM+VAR +FS G    H+  ++ ++       K   ++LDT GPE+      +  I L   + V+++  Q  E T     + +  L   V+ G  I +   L        V L+V D+D    +V C I N+  L +    +++  ++++LP +T
Sbjct:    4 TKIVCTIGPASESEEMLEKLMKAGMNVARLNFSHGSHEEHKARIDTIRKVADRLGKTIGILLDTKGPEIRTHDMKDGLIMLEKGKEVIVSMSQ-VEGTPEKFSVTYEDLINDVQVGSYILLDDGL--------VELQVKDIDKTKGEVKCDILNTGEL-KNKKGVNLPGVKVNLPGIT 171          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 46/176 (26.14%), Postives = 83/176 (47.16%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            TK++ T+GP S S EI+   +  GM+ AR +FS GD A H+E +E +K   K  K   A++LD  GP++           L   +    +   +    +    I++  L + +K G +I +   L        +  +V +V G D++C++     + +    ++V  + I LP +T
Sbjct:    4 TKMIFTIGPSSDSEEILREFIRIGMNAARLNFSHGDHASHKEKIELIKRLRKEEKSATAILLDIKGPKIRTYNFKNGEAELKNGDEFTFSCGDEILGDNTKCSISYKELYEDIKPGGSILVDDGL--------LEFKVKEVRGTDIICEVIEGGTI-KDHKGVNVPNVPIKLPAVT 170          
The following BLAST results are available for this feature:
BLAST of FC921671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KPYK2_YEAST4.329e-1227.87Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=P... [more]
KPYK_BACPY5.654e-1227.53Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYR_CANFA7.385e-1228.34Pyruvate kinase isozyme R (Fragment) OS=Canis fami... [more]
KPYK_SCHPO7.385e-1226.23Pyruvate kinase OS=Schizosaccharomyces pombe GN=py... [more]
KPYK_LEIME7.385e-1228.09Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1... [more]
KPYR_RAT9.645e-1226.20Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]
KPYM_RABIT9.645e-1227.27Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYK_MYCIT9.645e-1230.20Pyruvate kinase OS=Mycobacterium intracellulare GN... [more]
KPYK_STAHJ1.645e-1128.65Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]
KPYK_CLOPE1.645e-1126.14Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]

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Properties
Property NameValue
Genbank descriptionC32108A04EF RVDevelopN Citrus clementina cDNA clone C32108A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921671 ID=FC921671; Name=FC921671; organism=Citrus clementina; type=EST; length=690bp
AGATCAACAACAAACGAAAATCAAAATTTCTTTCTCAATTTCGTTGAAAT
ATTAAAAAAATAAAGAAAATAAAATGCCTTCAAATAATTTACTTCTTGAA
GAACCGATTAGAATGGCTTCAATTCTTGAGCCTTCAAAACCAACTTTCTT
TCCTGCAATGACGAAAATTGTTGGAACTCTTGGTCCAAGATCTCGAAGTG
TGGAGATAATATCTGGTTGCCTTAATGCAGGAATGTCAGTGGCAAGATTT
GATTTTTCATGGGGTGATACTGCATATCACCAGGAGACGCTTGAGAATCT
AAAGATAGCTATCAAGAGTACCAAGAAGCTTTGTGCGGTTATGTTAGACA
CAATTGGTCCAGAGTTGCTAGTTGTTACTAAGACTGAGCACCCCATTTCT
CTCCTTGCAGATGAGTCAGTTGTCCTTACACCAGATCAAGACAAAGAAGC
AACTTCAAATTTACTACCAATAAATTTTAGTGGACTGTCAAAGGCAGTGA
AGAAGGGAGATACCATATTTATTGGTCAATATCTTTTCACAGGAAATGAA
ACTACTTCAGTAATGTTGGAGGTCACCGACGTGGATGGTGAAGATGTGGT
TTGTCAGATAAAGAATTCTGCTATCTTGGCTCGGCAGTTGTATACCTTGC
ATGTCTCTCAAATTCGTATTGATCTGCCTACACTCACTGA
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