FC921691

Overview
NameFC921691
Unique NameFC921691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length650
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.026e-12
Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 1
Query:  238 YGYSTFKGKRSSMEDFYETSLSEVDG-QMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDF-------------IKDTKTAVVEVFKKTDE---NYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKP 633
            YG S+ +G R  MED +   +    G +  +FF VYDGH GSR A Y   HL ++++++ DF             +++ KT +   F K DE   N+     G  + +GSTA   ++    +   N GDSR V  R G     + DHKP
Sbjct:   24 YGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKP 171          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.026e-12
Identity = 43/135 (31.85%), Postives = 65/135 (48.15%), Query Frame = 1
Query:  328 FFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDT--------------KTAVVEVFKKTDENYLSE--------------EKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDE 648
            FFGVYDGHGG++ A+Y  + +   L+   + IK+               +   V+ + K D+    +              E    +  GSTA  A++    ++V+N GDSR V  R   ++PLS+DHKPDR DE
Sbjct:  237 FFGVYDGHGGAQVADYCHDRIHSALAEEIERIKEELCRRNTGEGRQVQWEKVFVDCYLKVDDEVKGKINRPVVGSSDRMVLEAVSPETVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDE 371          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  325 AFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDF----------IKDTKTAVVEVFKKTDENYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDE 648
            AF+GV+DGHGG   A Y+K H  + L    +F          ++  + +V   F + D   L+++    + +G+TA TA++ G +LLVAN GD R V  R G A+ +S DH+ + ++E
Sbjct:  114 AFYGVFDGHGGLDAAAYMKRHAMRFLFEDSEFPQASQVDETYVQSVENSVRRAFLQADLA-LADDLDISRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEE 230          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: PPM1K_PONAB (Protein phosphatase 1K, mitochondrial OS=Pongo abelii GN=PPM1K PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.285e-12
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 1
Query:  259 GKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEK----GQHKDAGSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDE 648
            GKR   ED ++ +    +   V +F VYDGHGG   A++   H+ K +       K+ +T +   F + D+ + S  +         +G+TA+ A+L  G  L+VA+VGDSR +  R G  + L+IDH P+R DE
Sbjct:  102 GKRKENEDRFDFAQLTDE---VLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDE 233          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.285e-12
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 1
Query:  241 GYSTFKGKRSSMED-FYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLS----EEKGQHKDAGSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDE 648
            G ++  GKR   ED F    L+E     V +F VYDGHGG   A++   H+ K +       KD +T +   F + D+ + S            +G+TA+ A+L  G  L+VA+VGDSR +  R G  + L+ DH P+R DE
Sbjct:   96 GCASLIGKRKENEDRFGFAQLTEE----VLYFAVYDGHGGPAAADFCHTHMEKCVMDLLPREKDLETVLTLAFLEIDKAFASYAHLSADASLLTSGTTATVALLRDGVELVVASVGDSRALLCRKGKPMKLTTDHTPERKDE 233          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.285e-12
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 1
Query:  259 GKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEK----GQHKDAGSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDE 648
            GKR   ED ++ +    +   V +F VYDGHGG   A++   H+ K +       K+ +T +   F + D+ + S  +         +G+TA+ A+L  G  L+VA+VGDSR +  R G  + L+IDH P+R DE
Sbjct:  102 GKRKENEDRFDFAQLTDE---VLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDE 233          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.285e-12
Identity = 49/149 (32.89%), Postives = 70/149 (46.98%), Query Frame = 1
Query:  238 YGYSTFKGKRSSMEDFYETSLSEVDG-QMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDF-------------IKDTKTAVVEVFKKTDE---NYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKP 633
            YG S+ +G R  MED +   +    G    +FF VYDGH GSR A Y   HL ++++++ DF             ++  KT +   F K DE   N+     G  + +GSTA   ++    +   N GDSR V  R G     + DHKP
Sbjct:   24 YGLSSMQGWRVEMEDAHTAVVGIPHGLDNWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALEPSVESVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKP 171          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.285e-12
Identity = 48/149 (32.21%), Postives = 72/149 (48.32%), Query Frame = 1
Query:  238 YGYSTFKGKRSSMEDFYETSLSEVDG-QMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDF-------------IKDTKTAVVEVFKKTDE---NYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKP 633
            YG S+ +G R  MED +   +    G +  +FF VYDGH GSR A Y   HL ++++++ DF             +++ K  +   F K DE   N+     G  + +GSTA   ++    +   N GDSR V  R+G     + DHKP
Sbjct:   24 YGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITNNEDFRAAGKSGSALEPSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKP 171          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.091e-12
Identity = 48/149 (32.21%), Postives = 71/149 (47.65%), Query Frame = 1
Query:  238 YGYSTFKGKRSSMEDFYETSLSEVDG-QMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDF-------------IKDTKTAVVEVFKKTDE---NYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKP 633
            YG S+ +G R  MED +   +    G +  +FF VYDGH GSR A Y   HL ++++++ DF             +++ K  +   F K DE   N+     G  + +GSTA   ++    +   N GDSR V  R G     + DHKP
Sbjct:   24 YGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP 171          
BLAST of FC921691 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.649e-12
Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  241 GYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEY----LKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHKDAGSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDE 648
            G ST  GKR   ED ++ +    D   + +F VYDGHGG+  AE+    +++++ + L    D  K    A +E+ K    +            G+TA+ A+L  G  L+VA+VGDSR +  R G    L+IDH P+R +E
Sbjct:   97 GCSTQLGKRKENEDRFKLARLTPD---ILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVKAFLEINKAFARHAHLSVDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEE 234          
The following BLAST results are available for this feature:
BLAST of FC921691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
PPM1B_RAT1.026e-1232.89Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
P2C07_ARATH1.026e-1231.85Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C47_ORYSJ1.750e-1234.75Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
PPM1K_PONAB2.285e-1234.07Protein phosphatase 1K, mitochondrial OS=Pongo abe... [more]
PPM1K_MOUSE2.285e-1235.21Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]
PPM1K_HUMAN2.285e-1234.07Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
PPM1B_MOUSE2.285e-1232.89Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PPM1B_BOVIN2.285e-1232.21Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
PPM1B_HUMAN5.091e-1232.21Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
PPM1K_XENLA6.649e-1234.04Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]

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Properties
Property NameValue
Genbank descriptionC32108C02EF RVDevelopN Citrus clementina cDNA clone C32108C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921691 ID=FC921691; Name=FC921691; organism=Citrus clementina; type=EST; length=650bp
GCGGCAGCATCAACATCAACATCAATATTGAATATGAATGACTCAAAACT
TACAAAAATAACAATTACACCAACAGCGGCAGCACTTGCAGATTCGAAAG
CGGAGCCGTCTGCATCTTCTTCCCGGGATGCTGATGCCAAGCCTTTAGAT
GTTATGATAGCGGCTCGGGATCCGGATGCCCTCTTCAGCGGCGGAGGCAT
GAGCTTTCTGACTGGAAGCCGAACTGCAAAGTTTAGCTATGGGTATTCCA
CTTTTAAAGGTAAAAGGTCTTCAATGGAAGACTTTTATGAGACAAGTTTA
TCTGAGGTTGATGGTCAGATGGTTGCTTTTTTCGGTGTTTATGACGGTCA
TGGAGGCTCCAGAACTGCAGAGTATCTTAAAAACCATCTCTTCAAAAATT
TAAGTAGCCATCCAGATTTTATAAAAGACACAAAGACAGCTGTTGTTGAA
GTTTTTAAAAAAACTGATGAGAATTACCTTAGTGAAGAAAAAGGCCAGCA
CAAAGATGCTGGGTCAACTGCTTCAACTGCTGTGCTGTTAGGGGATCGGC
TGCTTGTTGCAAATGTTGGTGATTCCAGAGTGGTGGCCTCCAGAGCTGGC
TCAGCTATTCCACTGTCTATTGATCATAAACCTGATCGATCTGATGAACG
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