FC921702

Overview
NameFC921702
Unique NameFC921702
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 66/223 (29.60%), Postives = 116/223 (52.02%), Query Frame = 2
Query:   38 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXX----LQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT-LSDYD---VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            ++++ V K+G G Y  V++  +    E                         L      PNI+KLLD++  +      L+FE ++    K +  + L+      ++ Y+++LL+ L +CHS  ++HRD+KP N++I+ +   ++L D+GLA  F  P + Y   V + +++ PE+L+  + Y  ++D+WSLGC+FA M+ R+   F G    DQL +I R LG
Sbjct:    2 ENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINADG-SIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR-ALFPGDSEIDQLFRIFRTLG 220          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CDK15_MOUSE (Cell division protein kinase 15 OS=Mus musculus GN=Cdk15 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 65/227 (28.63%), Postives = 116/227 (51.10%), Query Frame = 2
Query:   17 TVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG---PNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT-LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN-YDQLVKIARCLG 679
            ++ +G    Y  + K+G G Y++V++G+   + +                       +L  G    NI+ L DIV  +++ T    + H +   +   +P  L  ++VR ++++LL+ L Y H Q ++HRD+KP N+++ H   +L+L D+GLA     P + Y+  V + +++ P+ L+   +Y   LD+W  GC+F  M F+ +P F G  N  +QL KI   LG
Sbjct:   92 SLPFGAASSYLNLEKLGEGSYAKVYKGISRINGQLVALKVISMNAEEGVPFTAIREASLLKGLKHANIVLLHDIVHTKETLTFVFEYMHTDLAQYMSQHPGGLHPHNVRLFMFQLLRGLAYIHHQRVLHRDLKPQNLLLSH-LGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYSSELDIWGAGCIFIEM-FQGQPLFPGVSNILEQLEKIWEVLG 316          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 56/163 (34.36%), Postives = 96/163 (58.90%), Query Frame = 2
Query:  206 NIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT----LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            NI+KL D++  +  K   L+FEH++  D K L       L     + ++ +LL  + YCH   ++HRD+KP N++I+ E  +L++ D+GLA  F  P + Y   V + +++ P++L+  + Y   +D+WS+GC+FA M+    P F G  + DQL++I + LG
Sbjct:   61 NIVKLYDVIHAK--KRLILVFEHLDQ-DLKKLIDVCDGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMV-NGRPLFPGVSDTDQLMRIFKILG 218          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 56/163 (34.36%), Postives = 95/163 (58.28%), Query Frame = 2
Query:  206 NIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT----LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            NI+KL D++  +  K   L+FEH++  D K L       L     + ++ +LL  + YCH   ++HRD+KP N++I+ E  +L++ D+GLA  F  P + Y   V + +++ P++L+  + Y   +D+WS+GC+FA M+    P F G    DQL++I + LG
Sbjct:   61 NIVKLYDVIHAK--KRLILVFEHLDQ-DLKKLIDVCDGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMV-NGRPLFPGASETDQLMRIFKILG 218          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 57/164 (34.76%), Postives = 95/164 (57.93%), Query Frame = 2
Query:  206 NIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY-----DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            NI++L D+V     K   L+FE+++  D K    +  ++      V+ ++Y++L  + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+FA M  R+ P   G    D+L KI R LG
Sbjct:   59 NIVRLQDVVHSD--KRLYLVFEYLD-LDLKKHMDSSPEFIKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMANRR-PLSPGDSEIDELFKIFRILG 218          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: HOG1_WALIC (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia ichthyophaga GN=HOG1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 49/118 (41.53%), Postives = 80/118 (67.80%), Query Frame = 2
Query:  326 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            V+Y++Y++L+AL + H  G++HRD+KP N++I+ E   L++ D+GLA    P  +    V++RY+K PE+++  Q+YD ++D+WS+GC+FA MI  + P F G D+  QL  I   LG
Sbjct:   52 VQYFLYQMLRALKFVHPAGVVHRDLKPSNILIN-ENCDLKICDFGLARLQDP--QMTGYVSTRYYKAPEIMLTWQEYDSAVDIWSVGCIFAEMIDGR-PIFPGKDHVHQLTVITELLG 165          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: GSK3B_SPECI (Glycogen synthase kinase-3 beta OS=Spermophilus citellus GN=GSK3B PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 54/147 (36.73%), Postives = 86/147 (58.50%), Query Frame = 2
Query:  257 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            +L+ ++V  T ++V         TL    V+ Y+Y+L ++L Y HS GI HRD+KP N+++D +   L+L D+G A+    G+     + SRY++ PEL+    DY  S+D+WS GC+ A ++   +P F G    DQLV+I + LG
Sbjct:  129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLG 274          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: GSK3B_MOUSE (Glycogen synthase kinase-3 beta OS=Mus musculus GN=Gsk3b PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 54/147 (36.73%), Postives = 86/147 (58.50%), Query Frame = 2
Query:  257 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            +L+ ++V  T ++V         TL    V+ Y+Y+L ++L Y HS GI HRD+KP N+++D +   L+L D+G A+    G+     + SRY++ PEL+    DY  S+D+WS GC+ A ++   +P F G    DQLV+I + LG
Sbjct:  129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLG 274          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: GSK3B_HUMAN (Glycogen synthase kinase-3 beta OS=Homo sapiens GN=GSK3B PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 54/147 (36.73%), Postives = 86/147 (58.50%), Query Frame = 2
Query:  257 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            +L+ ++V  T ++V         TL    V+ Y+Y+L ++L Y HS GI HRD+KP N+++D +   L+L D+G A+    G+     + SRY++ PEL+    DY  S+D+WS GC+ A ++   +P F G    DQLV+I + LG
Sbjct:  129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLG 274          
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: GLKA_DICDI (Probable serine/threonine-protein kinase glkA OS=Dictyostelium discoideum GN=glkA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 62/215 (28.84%), Postives = 112/215 (52.09%), Query Frame = 2
Query:   44 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDI--VRDQQSKTPSLIFEHVNNTDFKVLYPT-LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            YE++++VG+G + +V+E  +  DN+                     +  +   PN +++LD+    +   K  +L+F+ +  T   +L    LS   ++   Y+L +A+ + HS+ I HRD+ P+N+++   + +L L D+G A+           + SRY++ PELLV   +Y   +D+WS+GC+ A M+  K P F G ++ DQL +I   LG
Sbjct:   91 YEIIKQVGQGTFGKVYEAKN-QDNKRVAIKKVEKSNHFISREYD--ILKIVAHPNCLRILDMFYTAEDNKKMQNLVFDFIPYTLASLLKKRQLSINFIKVLFYQLCQAIKHIHSKAICHRDITPNNILLS-SKGELTLADFGSAKILESNHTSMSYICSRYYRAPELLVGCSNYTTKIDIWSIGCILAEMLIGK-PLFPGTNSNDQLGRIIEVLG 300          
The following BLAST results are available for this feature:
BLAST of FC921702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK2_BOVIN2.429e-2129.60Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDK15_MOUSE2.429e-2128.63Cell division protein kinase 15 OS=Mus musculus GN... [more]
CDC2H_PLACH2.429e-2134.36Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLABA2.429e-2134.36Cell division control protein 2 homolog OS=Plasmod... [more]
CDC21_MEDSA2.429e-2134.76Cell division control protein 2 homolog 1 (Fragmen... [more]
HOG1_WALIC3.172e-2141.53Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
GSK3B_SPECI3.172e-2136.73Glycogen synthase kinase-3 beta OS=Spermophilus ci... [more]
GSK3B_MOUSE3.172e-2136.73Glycogen synthase kinase-3 beta OS=Mus musculus GN... [more]
GSK3B_HUMAN3.172e-2136.73Glycogen synthase kinase-3 beta OS=Homo sapiens GN... [more]
GLKA_DICDI3.172e-2128.84Probable serine/threonine-protein kinase glkA OS=D... [more]

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Properties
Property NameValue
Genbank descriptionC32108D02EF RVDevelopN Citrus clementina cDNA clone C32108D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921702 ID=FC921702; Name=FC921702; organism=Citrus clementina; type=EST; length=709bp
GGACTACGAGTCCCTCACCGTTCAGTGGGGGGAGCAGGATGATTACGAGG
TGGTGAGAAAGGTTGGGAGGGGGAAATATAGTGAAGTGTTTGAAGGCGTG
CACTGCACTGATAATGAAAAGTGTATTATTAAGATTCTTAAGCCTGTTAA
GAAGAAGAAGATTAAGAGGGAGATAAAAATACTTCAGAATCTTTGTGGTG
GACCGAATATTATCAAGTTGCTTGATATTGTACGAGACCAGCAATCAAAG
ACCCCAAGTCTTATATTTGAACATGTGAATAATACAGATTTTAAAGTGCT
TTATCCAACACTCTCGGACTATGATGTTCGGTATTACATCTATGAACTTC
TAAAGGCATTGGATTACTGCCACTCACAAGGCATAATGCATCGAGATGTG
AAGCCCCATAATGTGATGATTGATCATGAGCAAAGGAAACTTCGTCTTAT
AGATTGGGGTCTTGCAGAGTTTTATCATCCTGGCAAAGAATATAATGTTC
GTGTTGCTTCAAGATACTTTAAAGGTCCTGAGCTTCTTGTTGATCTGCAA
GATTATGATTATTCTTTAGACTTATGGAGTCTTGGTTGTATGTTTGCTGG
AATGATATTTCGTAAGGAGCCTTTCTTCTATGGGCATGATAATTATGATC
AGTTGGTCAAAATTGCCAGGTGCTTGGGACAGATGAGTTAATGCATCCCC
TGATAGTAC
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