FC921711

Overview
NameFC921711
Unique NameFC921711
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.359e-44
Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 1
Query:    1 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            NE G++NYP+VPGHE+VG VT++G+ V KFK G+ VGVG +V SC+ C +    +E YC   I TYN ++ DGT T GG++  +VVDQ +V+R P+N+PL+  APLLCAG+TVYSPM ++GMTEPG+  G+ GLGG
Sbjct:   56 NEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGG 191          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.359e-44
Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 1
Query:    1 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            NE G++NYP+VPGHE+VG VT++G+ V KFK G+ VGVG +V SC+ C +    +E YC   I TYN ++ DGT T GG++  +VVDQ +V+R P+N+PL+  APLLCAG+TVYSPM ++GMTEPG+  G+ GLGG
Sbjct:   56 NEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGG 191          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 1.775e-44
Identity = 83/139 (59.71%), Postives = 102/139 (73.38%), Query Frame = 1
Query:    1 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTE---PGQHLGVAGLGG 408
            N+WG+T YP+VPGHEI G VTKVG NV+ FK GD+VGVG + ASC  CE  ++  ENYC  + LTYN I  DG+ TYGGYS ++V  + +V+R PD +PLDA APLLCAGITVYSPM  +GM +    G+ LGV GLGG
Sbjct:   57 NDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGG 195          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.563e-43
Identity = 74/136 (54.41%), Postives = 103/136 (75.74%), Query Frame = 1
Query:    1 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            NE G+++YP+VPGHE+VG VT++G+ V KFK G+ VGVG +V SC+ C +  Q +E YC   I TYN ++ DGT T GG++  +VVDQ +V+R P+N+PL+  APLLCAG+TV+SPM ++ MTEPG+  G+ GLGG
Sbjct:   56 NEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGG 191          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.563e-43
Identity = 74/136 (54.41%), Postives = 103/136 (75.74%), Query Frame = 1
Query:    1 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            NE G+++YP+VPGHE+VG VT++G+ V KFK G+ VGVG +V SC+ C +  Q +E YC   I TYN ++ DGT T GG++  +VVDQ +V+R P+N+PL+  APLLCAG+TV+SPM ++ MTEPG+  G+ GLGG
Sbjct:   56 NEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGG 191          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 1.555e-40
Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 1
Query:   22 YPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            YP+VPGHEI G VT+VG +V  FK GD VGVGV V SCQ CE+    LEN+C   ++TYNS+D DGT T GGYS  I+V Q Y  + P + PL   APLLCAGITVY+PMI + M +PG+ LGV GLGG
Sbjct:   63 YPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGG 191          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.653e-40
Identity = 76/136 (55.88%), Postives = 98/136 (72.06%), Query Frame = 1
Query:    4 EWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYC-PNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            EWG  NYP+VPGHEI G VT VG+ V+K+++GD+VGVG  V SC++C S  +G+E YC P    TYNSI +DG  T GGYS+ IVVD++YVLR PD +PLD  APLLCAGIT+YSP+ ++        + + GLGG
Sbjct:   51 EWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWN-AGANTRVAIIGLGG 185          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.653e-40
Identity = 76/136 (55.88%), Postives = 98/136 (72.06%), Query Frame = 1
Query:    4 EWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYC-PNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            EWG  NYP+VPGHEI G VT VG+ V+K+++GD+VGVG  V SC++C S  +G+E YC P    TYNSI +DG  T GGYS+ IVVD++YVLR PD +PLD  APLLCAGIT+YSP+ ++        + + GLGG
Sbjct:   51 EWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWN-AGANTRVAIIGLGG 185          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.464e-40
Identity = 75/129 (58.14%), Postives = 90/129 (69.77%), Query Frame = 1
Query:   22 YPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            YP+VPGHEI G VT+VG +V  FK GD VGVG  V SC+ CE+    LENYC   + T+N +D DGT T GGYS  IVV + Y  + PD  PL+  APLLCAGITVYSPM+ + M +PG+ LGV GLGG
Sbjct:   63 YPLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQPGKSLGVIGLGG 191          
BLAST of FC921711 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.830e-39
Identity = 75/136 (55.15%), Postives = 95/136 (69.85%), Query Frame = 1
Query:    1 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESSQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMIYYGMTEPGQHLGVAGLGG 408
            N+ G + YP+VPGHEI G VTKVG NV +FK GD VGVG  V SC++CE   +G E  C   + T+N ID DG+ T GGYS  IVV + Y  + P + PL++ APLLCAGITVY+PM+ + M +PG+ LGV GLGG
Sbjct:   57 NQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGG 192          
The following BLAST results are available for this feature:
BLAST of FC921711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
CADH7_PICAB1.359e-4455.88Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB1.359e-4455.88Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH6_ORYSJ1.775e-4459.71Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH_PINTA2.563e-4354.41Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA2.563e-4354.41Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH4_ORYSJ1.555e-4059.69Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
ADHC_MYCTU2.653e-4055.88NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO2.653e-4055.88NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
CADH1_ORYSJ3.464e-4058.14Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH1_ARATH3.830e-3955.15Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionC32108D12EF RVDevelopN Citrus clementina cDNA clone C32108D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921711 ID=FC921711; Name=FC921711; organism=Citrus clementina; type=EST; length=410bp
AATGAATGGGGTGTCACCAATTACCCAATTGTTCCCGGGCATGAAATTGT
TGGTACTGTGACAAAAGTTGGAAATAACGTGTCAAAATTCAAAGAGGGTG
ACAAGGTTGGAGTTGGGGTCTTGGTAGCCTCCTGCCAAAAATGTGAAAGC
AGTCAGCAGGGCTTGGAGAATTACTGTCCTAATATGATACTTACATATAA
CTCCATTGATCGTGATGGAACAAAAACTTATGGTGGTTACTCAGATCTGA
TTGTTGTTGATCAGCATTATGTGCTCCGCTTTCCTGACAACATGCCTCTT
GATGCGGGTGCACCACTTTTGTGTGCGGGGATCACAGTGTACAGCCCAAT
GATATATTATGGAATGACTGAGCCAGGCCAGCATTTGGGTGTAGCAGGAC
TTGGTGGGCT
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