FC921729

Overview
NameFC921729
Unique NameFC921729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921729 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 1 
Query:  469 IGNITSTEAE--GVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNL 684
            + ++ STE    G  L F NDLD+  +G  VYFTDSS+ +QRR+FM L+  A   GRVL+YD  TK+  V++ NL
Sbjct:  181 VKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHLIMEATADGRVLEYDTETKEVNVMMENL 255
The following BLAST results are available for this feature:
BLAST of FC921729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APMAP_DANRE2.806e-1148.00Adipocyte plasma membrane-associated protein OS=Da... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32108F08EF RVDevelopN Citrus clementina cDNA clone C32108F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921729 ID=FC921729; Name=FC921729; organism=Citrus clementina; type=EST; length=689bp
GGGGGGGTTGGTGATTTTGCTTCTGGCCATGTACTGTGGCCTCGACCCTT
TGAAGCACAGTGCGATTTCTGAGTTCCCTGACTTTGTGTCTCACAAAGTT
GACATGCCGCCGTGGTCACTGATTCCTACAGTGAAAGATGACAAGAACTT
GCTTCAGAATTCGGAAATCAAGTTCTTGAACCAAATTCAGGGCCCCGAGA
GCATGGCTTTTGACCCTCTTGGCCGTGGACCTTATACTGGTGTTGCTGAT
GGCAGAATTCTCTTCTGGGATGGCCTTAAATGGACTGATTTTGCTTTTAC
TTCCAACAACAGGCCGGAACTATGTAATCCGAAACCAATTGCCATGAGTT
ATCTGAAGAATGAGCACATCTGTGGCAGGCCTTTGGGGCTCCGATTTGAC
AAGAAAACTGGTGATTTATACATTGCAGATGCATATTTTGGTCTGATGAA
GGTCGGTCCGGAAGGTGGATTGGCAACATCACTTCAACTGAAGCAGAAGG
TGTGCCACTGAGGTTCACTAATGATCTAGACATTGATGATGAAGGGAATG
TTTACTTTACTGACAGCAGCACCAATTATCAGAGGCGGAATTTCATGCAG
TTGGTTTTCTCTGCAGAAGATACTGGTAGGGTTCTAAAGTATGATCCAAC
TACNAAACAGACCACTGTCCTTTTGAGGAATCTTTCATT
back to top