FC921744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 7.880e-43 Identity = 89/160 (55.62%), Postives = 123/160 (76.88%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYA--ERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + M + LE+Y++ YA E +Q E E EY KLKAR+E LQR Q++ +GEDL L +KEL+S+E+Q+DS LK +R+ + + ++ ++ELQ+K+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKE 160
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.880e-43 Identity = 91/159 (57.23%), Postives = 119/159 (74.84%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQAN-EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRG+V+LKRIENKI+RQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +G+LFE+ST SCM + LERY Y +A+ +E + EY KLK R+E LQ Q++ +GEDL LSLKEL+ +E QI+ L IRS KNQ +L + EL++K+ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKE 159
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.880e-43 Identity = 91/159 (57.23%), Postives = 119/159 (74.84%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQAN-EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRG+V+LKRIENKI+RQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +G+LFE+ST SCM + LERY Y +A+ +E + EY KLK R+E LQ Q++ +GEDL LSLKEL+ +E QI+ L IRS KNQ +L + EL++K+ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKE 159
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.029e-42 Identity = 88/158 (55.70%), Postives = 117/158 (74.05%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + S M + L+RY++ Y ++ + N EY KLK R E LQR Q++ +GEDL L+ KEL+ +E+Q+D LK +RS K Q ML +S+LQ K+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKE 158
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.029e-42 Identity = 94/170 (55.29%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWT------------LEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRGRV+LKR+ENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALIVFS +GKL+E+ + S M + LERY++ Y P GN T EY KLKAR E LQR+Q++ MGEDL LS K+L+++E+Q+DS LK IRS + Q ML + +LQ+K+ Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYG---------APEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKE 161
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.293e-42 Identity = 92/165 (55.76%), Postives = 120/165 (72.73%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYA-------ERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + S M R LERY++ Y R+ A E+ EY KLK R + LQR Q++ +GEDL LS KEL+S+E+Q+DS LK IR+ + Q ML +++LQ K+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQ----QEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKE 161
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.293e-42 Identity = 86/159 (54.09%), Postives = 122/159 (76.73%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCY-AERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRGRV+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ + + + + LE+Y CY A+ A + +W E S+LK ++E LQR+Q+H +GEDL LS+KELQ +E+Q++ L R RK Q+M++ + +L++K+ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS-AGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKE 158
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.671e-42 Identity = 88/158 (55.70%), Postives = 116/158 (73.42%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV+LIVFS +GKL+E+ + S M + LERY++ Y ++ + N EY KLK R E LQR Q++ +GEDL L+ KEL+ +E+Q+D LK +R K Q ML +S+LQ K+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKE 158
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.138e-41 Identity = 91/165 (55.15%), Postives = 119/165 (72.12%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYA-------ERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + S M R LERY++ Y R+ A E+ EY KLK R + LQR Q++ +GEDL LS KEL+ +E+Q+DS LK IR+ + Q ML +++LQ K+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQ----QEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKE 161
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.535e-41 Identity = 88/159 (55.35%), Postives = 119/159 (74.84%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEP-NGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRGRV+LKRIE KINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + S M + LERY++ Y + + E + EY KLK R E LQR+Q++ +GEDL L+ KEL+S+E+Q+D LK IRS + QLML +++ Q+K+ Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKE 159 The following BLAST results are available for this feature:
BLAST of FC921744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921744 ID=FC921744; Name=FC921744; organism=Citrus clementina; type=EST; length=678bpback to top |