FC921744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.394e-31 Identity = 71/160 (44.38%), Postives = 115/160 (71.88%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG-NWTLEYSKLKARMEVLQR-NQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EY+ +S ++ +ERY++ ++ E N ++ E SKL+ ++ LQ N + +G+ + +SL++L+ VE +++ G+ IR+RKN+L+ + +QK++ Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VKSTVERYKK-ANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKRE 158
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.821e-31 Identity = 70/158 (44.30%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 178 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EYS +S ++ +ERY++ ++ + E N + E +KL+ ++ +Q + + MGE + +S KEL+++E +++ + IRS+KN+L+ I +QK++ Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS-VKGTIERYKK-AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKRE 173
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.821e-31 Identity = 77/158 (48.73%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 MGRG++++KRIEN +RQVTFSKRR+GLLKKAHE+SVLCDAEVA+IVFS GKLFE+S+ S M++ L RY Y + N N E LK + +LQ H G+ L LSLKELQ +E+Q++ L +R RK L+ + + E + K+ Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTS-MKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKE 157
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.378e-31 Identity = 71/158 (44.94%), Postives = 114/158 (72.15%), Query Frame = 1 Query: 181 RGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG-NWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDS 651 RG++++KRIEN NRQVTF KRRSGLLKKA+E+SVLCDAEVAL+VFS++G+L+EYS +S E I ERY++ ++ + E N ++ E +KLK ++ LQ + + +G+++ ++ +EL+ +E ++D GL IR+RKN+L+ I +Q++++ Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETI-ERYKK-ANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRET 200
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.378e-31 Identity = 66/165 (40.00%), Postives = 111/165 (67.27%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSC-MERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDSY*KEQ 666 MGRG++++KRIEN NRQVTFSKRR GLLKKA+E++VLCDA V +++FS+ GK+FEY + +C + ++E Y+ EI + +E ++++ ME L + F G+DL++L+L ++ +EQQ++ + +R+RK+QL+ Q + L++K+ ++Q Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ----TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQ 161
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 69/158 (43.67%), Postives = 109/158 (68.99%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 M RG+ Q+KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEV+LI+FS KGKL+E+++ S M+ ++RY R+ + E + E + + ++E L+ +++ +GE + S++ELQ +EQQ++ +K IR+RK Q+ + I +L++K+ Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS-SNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKE 157
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.180e-30 Identity = 69/159 (43.40%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDS 651 MGRG++ ++RI+N +RQVTFSKRR+GLLKKA E+S+LCDAEV L+VFS+ G+L+E+S+ + M+ +++RY E L N W E + L+ ++ LQ + K MGE+L+ L +++LQ +E +++ L+ IR RK+ L+ I EL K S Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTN-MKTVIDRYTN--AKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGS 156
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.180e-30 Identity = 65/159 (40.88%), Postives = 110/159 (69.18%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDS 651 MGRG++ +KRI+N +NRQVTFSKRR GL+KKA E+++LCDA+V LIVFS G+L+++S+ S M+ I+ERY+ E N + W E + L+ +++ L N + +GE++++ ++++LQ ++ Q++ L IR++K+QL+ + I +L +K S Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSS-MKSIIERYQE-AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGS 157
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.542e-30 Identity = 71/162 (43.83%), Postives = 109/162 (67.28%), Query Frame = 1 Query: 166 IVNMGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 ++ MGRG++++KRIENK +RQVTFSKRR+GLLKK HE+SVLCDA++ LI+FS+KGKLFEY S M +I+ RY + A ++ N ++ E +K++ LQ + + + G+DL+ +EL +E+Q++ L IR+RK +LM Q + L+K + Sbjct: 1 MIIMGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQLYD----EVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTE 158
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.858e-30 Identity = 68/160 (42.50%), Postives = 112/160 (70.00%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYC--YAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 M RGR +LKRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALIVFS +G+L+E+++ +++ ++RY+ Y + + +I+ + TL +K ++E L +++ +GE+L S++EL+ +E +++ L IR +K +L+ Q I++L++K+ Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAK---KLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKE 157 The following BLAST results are available for this feature:
BLAST of FC921744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921744 ID=FC921744; Name=FC921744; organism=Citrus clementina; type=EST; length=678bpback to top |