FC921744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27 Identity = 63/159 (39.62%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQ--ANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKK 645 MGRG++ +++I++ +RQVTFSKRR GL+KKA E+++LCDAEV LI+FS KL+++++ S ++ +ER+ E++L A+E++ W E L+ + LQ N + G +L LS+KELQ++E Q++ L+ IR ++ Q++ I EL +K Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSS-VKSTIERFNTAKMEEQELMNPASEVK---FWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRK 155
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.062e-27 Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERYCYAERQLQANEI---EPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGL 582 MGRG++++KRIEN NRQVTFSKRRSG+LKKA EISVLCDAEV +++FS+ GKL++Y S + + RILE+Y Q + +I E + + + E ++K + +Q +H GEDL L KEL +E+ +D+G+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKY--------QTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGI 132
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.917e-27 Identity = 65/147 (44.22%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 615 MGRG++++KRIEN NRQVT+SKRR+G+LKKA EISVLCDA V++I+F++ GK+ E+S+ S ++ IL++Y + R+L + E N E +K+K + +Q +H GED+ L+ +EL +E +D+GL IR+++N L+ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVD-ILDQYHK--LTGRRLWDAKHE---NLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLL 141
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.350e-26 Identity = 63/147 (42.86%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 615 MGRG++++KRIEN NRQVT+SKRR+G+LKKA EISVLCDA V++I+F++ GK+ E+S+ S ++ IL++Y + R L A + N E +K+K + +Q +H GED+ L+ +EL +E +++GL IR+++N+++ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVD-ILDQYHKLT-GRRLLDAK----HENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVL 141
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.929e-26 Identity = 60/155 (38.71%), Postives = 102/155 (65.81%), Query Frame = 1 Query: 181 RGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKK 645 R R+ ++RI+N RQVTFSKRR GL KKA E+S+LCDAEV L+VFSA GKLF++++ S ME+I++RY + ++ + ++++ G + ++LK + + GE+L L++++LQ +E+ ++SGL + K++ +L I L++K Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTS-MEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERK 175
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.702e-26 Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSK---LKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDSY*KEQTL 672 M R R ++KRIE+ RQVTFSKRR GL KKA E+SVLCDA+VALIVFS+ GKL +++ S M I+++Y + L E +P+ + LE+SK L ++ + GE+L LS+ ELQ +E+ +++GL + K+Q ++ ISELQ+K S E+ + Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS-MNEIIDKYNTH---SNNLGKAE-QPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENM 164
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26 Identity = 61/166 (36.75%), Postives = 108/166 (65.06%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEI-EPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLS-LKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDSY*KEQ 666 MG+G++++KRIE+ RQVTFSKRR+G LKKA+E++VLCDA+V ++VFS KGKLF++ + + ++E + RY R + E + +E ++L+ ++ L+ + + GEDL+ +S + EL ++ Q++S L + +RK++LM Q + ++++ EQ Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVI--LMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQ 164
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26 Identity = 62/160 (38.75%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANE-IEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLAD-LSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 M RG+VQL+RIEN ++RQVTF KRR+GLLKKA E+S+LC+A++ +I+FSA GKL++ +T ME ++ERY+ + ++ ++P E LK + +LQ+ ++ G + ++++EL ++E+ ++ + IRS K Q+M+Q I L+ K+ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDPK----QEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKE 156
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26 Identity = 62/160 (38.75%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANE-IEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLAD-LSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 M RG+VQL+RIEN ++RQVTF KRR+GLLKKA E+S+LC+A++ +I+FSA GKL++ +T ME ++ERY+ + ++ ++P E LK + +LQ+ ++ G + ++++EL ++E+ ++ + IRS K Q+M+Q I L+ K+ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDPK----QEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKE 156
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 62/157 (39.49%), Postives = 98/157 (62.42%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKK 645 M R ++Q+++I+N RQVTFSKRR GL KKA E+SVLCDA+VALI+FS+ GKLFE+ + S M+ +LER+ +L +E +++++ + + GE+L L ++ELQ +E+ +++GL + K+ ++ ISELQKK Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSS-MKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKK 156 The following BLAST results are available for this feature:
BLAST of FC921744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921744 ID=FC921744; Name=FC921744; organism=Citrus clementina; type=EST; length=678bpback to top |