FC921744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.493e-25 Identity = 65/167 (38.92%), Postives = 104/167 (62.28%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQ----LQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDSY*KE 663 M RG+VQ++RIEN ++RQVTF KRR GLLKKA E+SVLCDA+V +I+FS++GKL E +T+ M ++ERY+ + LQ ++ G + L+ +++LQR + G +++L +L ++E+ ++ + IR+ K Q+M Q I L+ K+ KE Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFL-----LREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKE 162
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 64/169 (37.87%), Postives = 112/169 (66.27%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDSY*KE--QTLA 675 MGR +V++KRIENK +RQVTFSKRR+GL++KA ++S+LC++ +A++V S GKL++ ++ M +I++RYE + +L+A ++ T Y LK +E++Q + ++ + S+ L S+E+Q+++ L + R+RK +LM+ + LQK ++ +E QTLA Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYE--IHHADELEALDLAEK---TRNYLPLKELLEIVQSKLEE---SNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTLA 161
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25 Identity = 61/157 (38.85%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKK 645 MGRG++++K+IEN+ RQVTFSKRR+GL+KK E+S+LCDA + LIVFSA GKL E+ ++ R+ + +RY + + + E L+ L+ + F G DLA + EL +E+Q++ + +R RKN+LM Q + L +K Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE--QNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRK 155
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25 Identity = 61/149 (40.94%), Postives = 97/149 (65.10%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSC-MERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLML 618 MGRG++++KRIEN NR VTFSKRR+GL+KKA EI+VLCDA+VALI+F++ GK+ +Y S + +L++Y++ + +E N + E ++K + LQ +H GED+ L+LK L +VE I+ GL +R + ++++ Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHE-----NLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILI 144
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25 Identity = 71/172 (41.28%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSC-MERILERYERYCYAERQLQANEIEPNGNWTLEYSK---LKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQK--KDSY*KEQTL 672 MGRG++++KRIEN NRQVT+SKRR+G++KKA E++VLCDA+VA+I+FS+ GK E+ + S ++ I +RY++ ++ E N TL + K R E+ QR MGEDL L EL+ +EQ +D+ LK +R RK ++ +K K SY +TL Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYE---NMQRTLSHLKDINRNLRTEIRQR-----MGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYEAYETL 164
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.410e-25 Identity = 63/164 (38.41%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDSY*KEQ 666 MGR ++++KRIENK +RQVTFSKRR+GL++KA ++SVLCDA VAL+V SA GKL+ +S+ + +IL+RY + +A+ L+A + + L Y + E+L+ +G ++ ++S+ L +E+ +++ L + R++K +LML+ + L++K+ KE+ Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQ-HAD-DLKALDHQSK---ALNYG---SHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEE 156
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.264e-24 Identity = 63/151 (41.72%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSC------MERILERYERYCYAERQLQANEI---EPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSR 600 MGRG++++KRIEN NRQVTFSKRR+G+LKKA EI VLCDAEV +++FS+ GKL +Y T + RILE+Y Q + +I E + + + E ++K + +Q +H GEDL L KEL ++E+ +++G +R + Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKY--------QTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK 143
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.156e-24 Identity = 62/165 (37.58%), Postives = 102/165 (61.82%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEV-------LQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKK 645 M RG++Q+KRIEN+ NRQVT+SKRR+GL KKAHE+SVLCDA+V++I+ S+ KL EY S + +++ ++Y++ + W+ Y K++ ++ L+R + MGE L DL +++ ++ + +D+ LKLIR RK +++ I +KK Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDL------------WSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKK 153
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.273e-24 Identity = 60/165 (36.36%), Postives = 102/165 (61.82%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDS-CMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHF-------MGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKK 645 M RG++Q+KRIEN+ NRQVT+SKRR+GL KKA+E++VLCDA+V++I+ S+ GKL E+ + S +++ + Y++ + W Y K++ ++ L+ ++ MGE L DL+ ++L+ + + +D+ LKLIR RK +++ I +KK Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDL------------WNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKK 153
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.273e-24 Identity = 62/166 (37.35%), Postives = 104/166 (62.65%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKL-KARMEVLQRNQ------KHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKD 648 M RG++Q+KRIEN+ NRQVT+SKRR+GL KKAHE++VLCDA V++I+FS+ KL EY S ++ + I++ Y+ I W +Y ++ + + ++L+ N+ K +GE L +L ++EL+ +E ++++ KL+R RK + + I +KK+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQ------------TISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKN 154 The following BLAST results are available for this feature:
BLAST of FC921744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921744 ID=FC921744; Name=FC921744; organism=Citrus clementina; type=EST; length=678bpback to top |