FC921744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23 Identity = 59/148 (39.86%), Postives = 100/148 (67.57%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 615 MGRG++++KRIEN NRQVT+SKRR+G++KKA EI+VLCDA+V+LI+F GK+ EY S + + +L+ Y++ + R+L + E N + E ++K + +Q +H GED+ L+ KEL +E+ + +GL I +++++++ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQK--TSGRRLWDAKHE---NLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEIL 143
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23 Identity = 57/162 (35.19%), Postives = 107/162 (66.05%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQL--MLQSISELQKKDS 651 MGRG++++KRIEN NRQVT+SKRR+G++KKA EISVLCDA V++I+F++ GK+ E+ S + + +L+ Y + + ++L + E N E +++K + +Q +H GED+ L+ KEL +E +++G +++++ + M++ +E+ ++++ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHK--LSGKRLWDPKHEHLDN---EINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFVRMMRKHNEMVEEEN 157
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.635e-22 Identity = 67/182 (36.81%), Postives = 105/182 (57.69%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWT----------------------LEYSKLKARMEVLQR---NQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKK 645 M R R +++RIE+ RQVTFSKRR GL KKA E++VLCDA+VAL+VFS+ GKL ++++ S M I+++Y + + L + +P+ + LE+SK + E L + GE+L LS++ELQ +E+ +++GL+ + K+Q +Q ISELQ+K Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS-SNMNEIIDKYTTH---SKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRK 178
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.970e-21 Identity = 52/141 (36.88%), Postives = 89/141 (63.12%), Query Frame = 1 Query: 253 GLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSC-MERILERYERYCYAERQLQAN--EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKKDSY*KEQ 666 GLLKKA E+++LCDA++ +I+FS+ GK+FE+S+ M I++RY++ L N + N E +++K ++ LQ +HF GEDL L++ E+ +EQQ++ + +RSRK QL+ Q + L++K++ +EQ Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK-------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQ 135
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.177e-20 Identity = 55/165 (33.33%), Postives = 98/165 (59.39%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKAR-------MEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQKK 645 MGRG++++++IENK NRQVTFSKRR+G++KKA E++VLCDA+V+L++ S+ KL Y S ++++ + Y++ IE W ++ +++ + +L+R MG DL L+L EL +++Q+++ + IR++K + +KK Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQK------------IEGVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKK 153
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 55/162 (33.95%), Postives = 94/162 (58.02%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY--STDSCMERILERYERYCYAE-----RQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISELQ 639 MGRGR ++KRIEN RQ TF KRR GL KKA E++VLCDA++ L++FSA GKL+ + T + +ERYE + + RQ + E+E K+ + ++L++ + +D + ++ L+++E +++ ++ +RS K++ + I LQ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE----------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQ 152
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.822e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERY 393 MGR ++Q+ RI ++ NRQVTF+KR+ G++KKA+E+SVLCD E+ALI+FS+ KL++Y STD M+R+L +Y Y Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTD--MDRVLLKYTEY 72
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERY 393 MGR ++Q++RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F+ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERY 393 MGR ++Q++RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F+ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of FC921744 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 175 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSAKGKLFEY-STDSCMERILERYERY 393 MGR ++Q++RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F+ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72 The following BLAST results are available for this feature:
BLAST of FC921744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921744 ID=FC921744; Name=FC921744; organism=Citrus clementina; type=EST; length=678bpback to top |