FC921746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 55/193 (28.50%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 1 GKESKGEGLMEKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP----VADEGSDHF--NEASNPASRSWSPNIISRKTVPNLDNHSFHPHW 561 G+ + E+ + C +Y T C+ G C+F+H + V + N G G C+Y+L G CK+G TCKF H +EK + +LN LG P+R +E EC +Y+R G C + C+F+HP P VA S + A++P ++ P ++ T+ + P W Sbjct: 55 GESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRK------LAVAAARMN--GEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRV------QLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPGQSATSPGQHTY-PGAVTNWTLSRSASFIASPRW 232 HSP 2 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 35/100 (35.00%), Postives = 50/100 (50.00%), Query Frame = 1 Query: 211 CKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHP----------DPVADEGSDHFNEASNP 480 C++++ G CK+G CKF H KE+ + LN LGLP+R E C FY R G C +G +C+F+HP P D S H+ + +P Sbjct: 324 CQFYMKTGDCKFGAVCKFHHPKER------LVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSPRGDVSSMHYQLSPSP 417
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H8_ORYSJ (Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 51/166 (30.72%), Postives = 75/166 (45.18%), Query Frame = 1 Query: 19 EGLMEKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIG-CKYHLSAGGCKYGNTCKFSHSKE--------KPQTYIKKSEK-------------------ASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPD 432 E E+ + C F+ T CK G C+F+H EK N L N S++ + C ++ G CK+ CKF+H K+ +P++ + + A+ E N GLP+R E++CPFYM+ GSC +G CRFNHPD Sbjct: 151 ESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKV-NALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPD 315 HSP 2 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 46/145 (31.72%), Postives = 65/145 (44.83%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKE---NKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLG-LPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDHFNEAS 474 C FY T CK G +C+F H +P G+ KE N S E G C + + G CK+G+ CKF+H KEK + + LP+R E C FY + G C + C+FNHP + S + E++ Sbjct: 111 CAFYMMTRTCKFGGSCKFDHPQW-----VPEGGIPNWKEQAANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESA 250
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 57/183 (31.15%), Postives = 81/183 (44.26%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKP----QTYIK-----------KSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDH--FNEASNPASRSWSPNIISRKTVPNLDNHSF 549 C +Y CK G +C ++H +P P G + K + G C Y++ G CK+G C+F+H P Q Y KS+ +LN LGLP+R C +YM G C +G +C+F+HPDP GSDH + +SN S NI S + H+F Sbjct: 50 CSYYVKFGSCKFGISCVYNHP-----DPRPQHGADDKKPAE--QFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDP----GSDHEKWVVSSNANQVSSQVNIYSVLDHGESNEHTF 221
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H26_ARATH (Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis thaliana GN=ZFN2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 49/137 (35.77%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPEL-NFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDH 459 C+F+ T C +G +CR++H + LP G+ ++ L E G C+ G CKYG TCK+ H K++ A P L N LGLP+R E CP+YM+ G C +GV C+F+HP P + + H Sbjct: 50 CQFFLRTGQCGYGNSCRYNHPLTN----LP-QGIIYYRDQ----LPERVGQPDCE----TGACKYGPTCKYHHPKDR--------NGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQPSNGH 165
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: ZFNL_PEA (Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 435 C +Y T C+ G CRF+H + L + MK G E G C+Y+L G CK+G TC+F H K+K + + LN LG P+R +E E +Y+R G C +G C+F+HP P Sbjct: 36 CSYYIRTGLCRFGATCRFNHPPNRK---LAIATAR-MK----GEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVA------LNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHPQP 149
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H6_ORYSJ (Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 43/136 (31.62%), Postives = 65/136 (47.79%), Query Frame = 1 Query: 25 LMEKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPD 432 L E+ + C +Y T C G+ CR++H ++ F G G + E G C+Y++ G CK+G CK+ H K+ LN G PIR+ E EC +YM+ G C +G C+F+HP+ Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTE--FGG--GARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVL-------PVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPE 180 HSP 2 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 136 LPFSGVNGMKEN--KGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHP 429 +P++ G N + E G C+Y++ G CK+G TCK+ H +E + K+ +N L LP+R C +Y +NG C YGV C+++HP Sbjct: 286 VPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPREL------SAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H5_ORYSJ (Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 1 Query: 1 GKESKGEG-LMEKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPD 432 G E+ G L E+ + C +Y T C +GE CR++H +++ + +G G K E G C+Y++ G CK+G+ CK+ H +E + LN G P+R E +C +Y++ G C +G C+F+HP+ Sbjct: 39 GGEAVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAV-LNG--GGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAVM--------LNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPE 172
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H32_ARATH (Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 435 C +Y T C +G CR++H +++ G E G C+++L G CK+G +CKF H K + LN G P+R + EC +Y++ G C +G+ C+F+HP P Sbjct: 51 CAYYMRTGVCGYGNRCRYNHPRDRASVEATVRAT--------GQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAG------GSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQP 164 HSP 2 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 30/80 (37.50%), Postives = 47/80 (58.75%), Query Frame = 1 Query: 190 EMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHP 429 E G C+Y+L G CK+G +CKF H +++ +A+ L+ +GLP+R C FY++NG C +G C+F+HP Sbjct: 288 ERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPP------RANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14 Identity = 43/133 (32.33%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 31 EKTVQIQCKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHP 429 E+ + C +Y T C+ G CRF+H ++ V KG E G C+++L G CK+G TCKF H + K S +N L P+R +E +C +++R G C +G C+FNHP Sbjct: 41 ERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKL-------VIATARIKG-EYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGI------DGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHP 159
BLAST of FC921746 vs. ExPASy Swiss-Prot
Match: C3H42_ORYSJ (Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa subsp. japonica GN=Os06g0519400 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 47/150 (31.33%), Postives = 68/150 (45.33%), Query Frame = 1 Query: 52 CKFYQGTEGCKHGEACRFSHSMEKSENPLPFSGVNGMKENKGGSLVEMTGLIGCKYHLSAGGCKYGNTCKFSHSKEK-PQTYIK-------------KSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDH 459 C +Y CK G C ++H P +G E+ + G C ++L G CKYG C+F+H ++ PQ + KSE +LNFLGLP+R C +YM G C +G +C+F+HP + GS H Sbjct: 85 CSYYVEFGSCKFGMRCLYNH-------PAKHAGGCDKLEHP-----QRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHP----NSGSGH 218 The following BLAST results are available for this feature:
BLAST of FC921746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921746 ID=FC921746; Name=FC921746; organism=Citrus clementina; type=EST; length=696bpback to top |