FC923092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYC_ORYSJ (Phytochrome C OS=Oryza sativa subsp. japonica GN=PHYC PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 5.422e-71 Identity = 135/230 (58.70%), Postives = 169/230 (73.48%), Query Frame = 3 Query: 15 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME---EENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 W++G TP+E+++K+I WL H TGLSTDSL EAGYPGAA LG VCGMA +I+SKDF+FWFRSHTAKE+KWGGAKH P + DNG KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N + + K+QG+ EL +V EMVRLIETATAPI VD +G+INGWN K AELTGLP EA+GK L+D V+ ++S V+ ++ Sbjct: 455 WVLGSTPSEAEIKNIVAWLQEYHDGSTGLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVMEAIGKPLVDLVI-DDSVEVVKQIL 683
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_LATSA (Phytochrome type A OS=Lathyrus sativus GN=PHYA PE=3 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.082e-71 Identity = 128/228 (56.14%), Postives = 168/228 (73.68%), Query Frame = 3 Query: 9 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 + WL+G TPTE Q+++IA W+ H D TGLSTDSL +AG+PGA L VCGMA RITSKD +FWFRSHTA E++WGGAKH P +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++ ++ + + + NT+ N K++G+ EL +V EMVRLIETAT PI VD GT+NGWN K+AELTGLP EA+GK L+ +V + S V+ ++ Sbjct: 454 KLWLLGATPTEYQIREIALWMSEYHTDSTGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIGKHLL-TLVEDSSTDIVKKML 680
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYC_SORBI (Phytochrome C OS=Sorghum bicolor GN=PHYC PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.060e-70 Identity = 136/217 (62.67%), Postives = 164/217 (75.58%), Query Frame = 3 Query: 18 LVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 656 L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL +V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV Sbjct: 455 LLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV 670
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_SOLTU (Phytochrome A OS=Solanum tuberosum GN=PHYA PE=2 SV=2) HSP 1 Score: 264.618 bits (675), Expect = 3.515e-70 Identity = 126/224 (56.25%), Postives = 163/224 (72.77%), Query Frame = 3 Query: 21 VGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 +G+ P++ QL DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RI+ KD+LFW+RSHTA EV+WGGAKH P KD+G KMHPRSSFK FLEVVK RS PW+ E++ IHSLQ+++R++F++ + N + + +T+ N K+ G+ EL +V EMVRLIETA+ PIF VD G +NGWN KVAELTGLP EA+GK L+ +V + S V ++ Sbjct: 458 LGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGFLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLL-TLVEDSSVDTVNKML 680
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYC_ORYSI (Phytochrome C OS=Oryza sativa subsp. indica GN=PHYC PE=2 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 1.023e-69 Identity = 134/230 (58.26%), Postives = 168/230 (73.04%), Query Frame = 3 Query: 15 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME---EENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 W++G TP+E+++K+I WL H TGLSTDSL EAGYPGAA LG V GMA +I+SKDF+FWFRSHTAKE+KWGGAKH P + DNG KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N + + K+QG+ EL +V EMVRLIETATAPI VD +G+INGWN K AELTGLP EA+GK L+D V+ ++S V+ ++ Sbjct: 455 WVLGSTPSEAEIKNIVAWLQEYHDGSTGLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVMEAIGKPLVDLVI-DDSVEVVKQIL 683
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_POPTM (Phytochrome A OS=Populus tremuloides GN=PHYA PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.278e-69 Identity = 125/228 (54.82%), Postives = 167/228 (73.25%), Query Frame = 3 Query: 9 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 + W +G+TP++ QL+DIA+WL H D TGLSTDSL +AGYPGA LG VCGMA RITSKD LFWFRS TA E++WGGAKH P KD+G +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F+++E + + + + K++G+ EL +V EMVRLIETAT PI VD G +NGWN K++ELTGL +A+GK L+ +V + S V+ ++ Sbjct: 454 KIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDIVKRML 680
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA1_MAIZE (Phytochrome A OS=Zea mays GN=PHYA1 PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.929e-68 Identity = 126/231 (54.55%), Postives = 164/231 (71.00%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G + W + PTESQ++DIA+WL HGD TGLSTDSL +AGYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR SFKAFLEVVK +S PW E++AIHSLQ+++R + + + ++ G Q G K+ G+ EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V + S V+ ++ Sbjct: 456 GDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEVVKTKSLPWSDYEMDAIHSLQLILRGTLNDASK--PAQASGLDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSLVQRML 683
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_CUCPE (Phytochrome A OS=Cucurbita pepo GN=PHYA PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 4.296e-68 Identity = 126/228 (55.26%), Postives = 159/228 (69.74%), Query Frame = 3 Query: 9 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 + W +G+TP + QL DIA WL H D TGLSTDSL +AGYPGA LG VCGMA RIT+ D +FWFRSHTA E++WGGAKH KD+ KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ + ++ T K++G EL SV EMVRLIETAT PI VD G INGWN K+AELTGLP +A+GK L+ +V + S V ++ Sbjct: 453 KIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPGAIALGDEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELESVTSEMVRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLL-TLVEDSSVEVVRKML 679
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_ORYSJ (Phytochrome A OS=Oryza sativa subsp. japonica GN=PHYA PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.329e-68 Identity = 127/230 (55.22%), Postives = 163/230 (70.87%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 GG+ W + PTESQ++DIA+WL + H D TGLSTDSL +AGYPGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAKH P KD+ +MHPR SFKAFLEVVK +S PW E++AIHSLQ+++R + + + + N Q K+ G+ EL +V EMVRL+ETAT PI VDS+G +NGWN KVAELTGL EA+G+ ++ VV E S V+ ++ Sbjct: 456 GGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDN-QVGDLKLDGLAELQAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHIL-TVVEESSVPVVQRML 683
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_ORYSI (Phytochrome A OS=Oryza sativa subsp. indica GN=PHYA PE=2 SV=2) HSP 1 Score: 256.914 bits (655), Expect = 7.329e-68 Identity = 127/230 (55.22%), Postives = 163/230 (70.87%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 GG+ W + PTESQ++DIA+WL + H D TGLSTDSL +AGYPGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAKH P KD+ +MHPR SFKAFLEVVK +S PW E++AIHSLQ+++R + + + + N Q K+ G+ EL +V EMVRL+ETAT PI VDS+G +NGWN KVAELTGL EA+G+ ++ VV E S V+ ++ Sbjct: 456 GGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDN-QVGDLKLDGLAELQAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHIL-TVVEESSVPVVQRML 683 The following BLAST results are available for this feature:
BLAST of FC923092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923092 ID=FC923092; Name=FC923092; organism=Citrus clementina; type=EST; length=694bpback to top |