FC923092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_SORBI (Phytochrome a OS=Sorghum bicolor GN=PHYA PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.250e-67 Identity = 125/230 (54.35%), Postives = 162/230 (70.43%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 G + W + PTESQ++DIA+WL HGD TGLSTDSL +AGYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR SFKAFLEVVK +S PW E++AIHSLQ+++R + + + + N Q K+ G+ EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V + S V+ ++ Sbjct: 456 GDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDN-QIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSIVQRML 683
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_ARATH (Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 2.132e-67 Identity = 123/228 (53.95%), Postives = 164/228 (71.93%), Query Frame = 3 Query: 9 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 + W +G TP+E L++IA WL H D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + ++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGL EA+GK + +V + S V+ ++ Sbjct: 455 KIWKLGTTPSEFHLQEIASWLCEYHMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGKHFL-TLVEDSSVEIVKRML 681
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA1_TOBAC (Phytochrome A1 OS=Nicotiana tabacum GN=PHYA1 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.204e-67 Identity = 123/224 (54.91%), Postives = 161/224 (71.88%), Query Frame = 3 Query: 21 VGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 +G+TP++ QL DI WL H D TGLSTDSL +AG+PGA LG VCGMA RI+ K +LFW+RSHTA EV+WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++ ++ + + + +T+ N K+ G+ EL +V EMVRLIETA+ PIF VD G +NGWN K+AELTGLP EA+G L+ +V + S V ++ Sbjct: 458 LGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLL-TLVEDSSVDTVSKML 680
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_PETCR (Phytochrome A OS=Petroselinum crispum GN=PHYA PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.689e-64 Identity = 124/235 (52.77%), Postives = 160/235 (68.09%), Query Frame = 3 Query: 9 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRD--SFQEMEEENDSKVQGN-----TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 + + +G TP++ QL+DI WL H D TGLSTDSL +AGYPGA LG VCGMA +ITS D LFWFRSH A ++WGGAK P+ +G KMHPRSSFKAFLEVVK RS W+ E++AIHSLQ+++R S ++ +++ N T+ N K++G+ EL +V EMVRLIETAT PIF VD+ +NGWN K+AELTGLP +AMGK L+ +V + S G V L+ Sbjct: 452 KVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDAGYPGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSSFKAFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTDVIHTKLNDLKIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLL-TLVEDSSVGTVVFLL 685
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA3_AVESA (Phytochrome A type 3 OS=Avena sativa GN=PHYA3 PE=1 SV=3) HSP 1 Score: 245.358 bits (625), Expect = 2.207e-64 Identity = 120/230 (52.17%), Postives = 158/230 (68.70%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 GG+ W + PTESQ+ DIA+WL + H D TGLSTDSL +AGYPGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAK+ P D+ +MHPR SFKAFLEVVK +S PW E++AIHSLQ+++R + + + N Q K+ G+ EL +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V + S V+ ++ Sbjct: 454 GGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDN-QIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEDSSVPVVQRML 681
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_SOYBN (Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.916e-64 Identity = 122/237 (51.48%), Postives = 162/237 (68.35%), Query Frame = 3 Query: 9 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG-NTQQNGSKMQGVD--------ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 + W +GVTP+E Q+++IA WL H D T STDSL +AG+P A LG VCGMA+ R+T+KD +FWFRSHTA E++WGGAKH KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQI++R++F+E E D + NT+ K++G++ EL +V E+VRL TAT PI VD G +NGWN K+AELTGLP EA GK L+ +V + S V+ ++ Sbjct: 452 KVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALSLGDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIERMQELEAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSSTDRVKKML 687
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA4_AVESA (Phytochrome A type 4 OS=Avena sativa GN=PHYA4 PE=1 SV=3) HSP 1 Score: 243.817 bits (621), Expect = 6.420e-64 Identity = 119/230 (51.74%), Postives = 157/230 (68.26%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 GG+ W + PTESQ+ DIA+WL + H D TGLSTDSL +AGYPGA+ LG +CGMA A+I SKD +FWFRSHTA E++WGGAKH D+ +MHPR SFKAFLEVVK +S PW E++AIHSLQ+++R + + + N Q K+ G+ EL +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S V+ ++ Sbjct: 454 GGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGASALGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFKAFLEVVKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREASLDN-QIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVPVVQRML 681
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYC_ARATH (Phytochrome C OS=Arabidopsis thaliana GN=PHYC PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.430e-63 Identity = 115/226 (50.88%), Postives = 167/226 (73.89%), Query Frame = 3 Query: 15 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESXGAVENLI 692 W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA I+ KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+ E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA PIF VD+SG INGWN+K AE+TGL +A+GK + ++V ++S V+N++ Sbjct: 448 WSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVETVKNML 667
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHYA_ANASP (Cyanobacterial phytochrome A OS=Anabaena sp. (strain PCC 7120) GN=aphA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11 Identity = 42/131 (32.06%), Postives = 60/131 (45.80%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP---EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQ 386 G C L+G TP L + WL NN + TDSL + YP A G+ I+ ++++ WFR + V WGG + P D ++ PR SF+ + E V+ S PW EI A L+ Sbjct: 373 GDHCTLIGETPKAEDLVFLVQWLKNNVEEEV-FYTDSLPQV-YPDAERYKNVASGLLAIPISQRNYVLWFRPEVIQTVNWGGDPNQPFEVNKLDGNVRLCPRKSFELWKETVRLTSLPWRYVEIRAALELR 501
BLAST of FC923092 vs. ExPASy Swiss-Prot
Match: PHY1_SYNY3 (Phytochrome-like protein cph1 OS=Synechocystis sp. (strain PCC 6803) GN=cph1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11 Identity = 44/144 (30.56%), Postives = 67/144 (46.53%), Query Frame = 3 Query: 3 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH---PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEE 425 G + LVG TP E ++ + WL N T SL++ YP A G+ I +FL WFR + V WGG +H +D ++HPR SF + E+V+ +S PW+ EI + +L+ + + EE Sbjct: 373 GEKLILVGETPDEKAVQYLLQWLENREVQDV-FFTSSLSQI-YPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKIELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQAEE 514 The following BLAST results are available for this feature:
BLAST of FC923092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923092 ID=FC923092; Name=FC923092; organism=Citrus clementina; type=EST; length=694bpback to top |