FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 84/225 (37.33%), Postives = 127/225 (56.44%), Query Frame = 1
Query:   16 YKFQDLKI-----ATGSFSEENRIQ----GSVYRGSF-KGDDAAVKVMKGDVS-------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            Y+ +DL I     AT +FS+ N I     G VY+ +   G   AVK + GD         +E+ +L +  H N++ L G+CVH+    L+Y F +NG+L  WLH N  +    L W +R+ I    ++ L Y+H+   P  VH+++K+SNILLD N +A + +FGL+R           Y   +T  +VGT GY+ PEY +  V T + DV++FGVV+LELL+G+
Sbjct:  786 YEVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENP-EGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILP-------YRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGK 1002          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 83/230 (36.09%), Postives = 132/230 (57.39%), Query Frame = 1
Query:   22 FQDLKIATGSFSEENRIQ----GSVYRGSFK-GDDAAVKVM-------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGDQNCGAE 675
            ++ ++ AT  F+E N+I     G VY+G+F  G + AVK +       + +  +E+ ++ K+ H N++RL GF +      LVYE+  N +L   L     Q    L W QR  I   +A  + YLH+ +    +H++LK SNILLD ++  KI +FG+AR    D+ +        T  +VGTYGYMAPEY  +G  + K DV++FGV+VLE++SGR++ +  ++ GA+
Sbjct:  341 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQ--LDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDN------TSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFGESDGAQ 562          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 81/221 (36.65%), Postives = 131/221 (59.28%), Query Frame = 1
Query:   22 FQDLKIATGSFSEENRIQ----GSVYRGSFK-GDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH-SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            F  +++AT  FS +N++     G+VY+G    G++ AVK +         +  +E++++ K+ H N++RL GFC+      L+YEF  N +L  ++  SNR    D   W+ R +I   VA  L YLH+ +    VH+++K SN+LLD  +  KI +FG+A+  ++D+  Q     + T  V GTYGYMAPEY  +G  + K DVF+FGV+VLE++ G+++
Sbjct:  334 FDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILD---WETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQ----TRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKN 547          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 80/214 (37.38%), Postives = 127/214 (59.35%), Query Frame = 1
Query:   40 ATGSFSEENRIQ----GSVYRGSF-KGDDAAVKVM-----KGDVS--SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            AT  FS EN +     G+VY+G+   G + AVK +     +GD+   +E+++L ++ H N+++L GFC       LVYEF  N +L  ++  +  ++   LTW+ R +I   +A  L YLH+ +    +H++LK SNILLD  +  K+ +FG AR  +SDE          T+ + GT GYMAPEY+ +G I+ K DV++FGV++LE++SG  +
Sbjct:  349 ATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSL--LTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAE------TKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERN 554          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 78/222 (35.14%), Postives = 128/222 (57.66%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGSFKGD-DAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            + F  +++AT +FS  N++     G VY+G    + + AVK +         +  +E+ I+ K+ H N++RL GFC+      LVYEF  N +L  +L   + ++   L WK+R  I   V   L YLH+ +    +H+++K SNILLD ++  KI +FG+AR+   D+ E        T  VVGT+GYM PEY+ +G  + K DV++FGV++LE++ G+++
Sbjct:  327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQ--LDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTE------DQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKN 540          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 89/227 (39.21%), Postives = 129/227 (56.83%), Query Frame = 1
Query:   43 TGSFSEENRIQ----GSVYRGSFKGDD--AAVKVMKGDVSSE--------INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGDQNCGAELL 681
            T SFS EN I     GSVYR    G    A  K+ K   + E        +N + +I H+NI++L GFC       L++E+  NG L D LH +  +    L+W  RV+IA + A AL YLH+  +PP +H+N K++NILLD ++R  +++ GLA    S      G   QL+  ++  YGY APE+ E G+ T K DV++FGVV+LELL+GR+S    ++ G + L
Sbjct:  475 TNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDD-RLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISS------GAVSQLSGQLLAAYGYGAPEF-EYGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFL 693          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 82/222 (36.94%), Postives = 129/222 (58.11%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGSF-KGDDAAVKVM-------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            + F+ ++ AT  FS  N++     G VY+G+   G   AVK +       + +  +E+ ++ K+ H N+++L GFC+      LVYEF  N +L  +L  +R Q+   L W  R +I   +A  + YLH+ +    +H++LK  NILLD ++  K+ +FG+AR  E D+ E        TR VVGTYGYM+PEY   G  + K DV++FGV+VLE++SGR++
Sbjct:  328 FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQ--LDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAH------TRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKN 541          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33
Identity = 85/223 (38.12%), Postives = 130/223 (58.30%), Query Frame = 1
Query:   13 LYKFQDLKIATGSFSEENRI-----QGSVYRGSF-KGDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 642
            ++  ++LK AT +FS  NR+     QG+VY+G   +G   AVK  K        +  +E+ +L +INH NI++L G C+      LVYE+  NG L   LH         +TW+ R++IA ++A AL+Y+H   + P  H+++KT+NILLD   RAK+++FG +RS    +         LT  V GT+GYM PEY  +   T K DV++FGVV++EL++G +
Sbjct:  419 IFSSKELKKATDNFSM-NRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQ-------THLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEK 633          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33
Identity = 82/223 (36.77%), Postives = 133/223 (59.64%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGSFK-GDDAAVKVM-------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS-NRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            +K+  L+ ATGSF   N++     G+VY+G    G D AVK +         D  +E+N++  + H N++RL G       + LVYE+  N +L  ++   NR +T D   W++R  I    A  L YLH+ ++   +H+++K SNILLD+ L+AKI +FGLARS + D+         ++  + GT GYMAPEY+ +G +T  +DV++FGV+VLE+++G+++
Sbjct:  313 FKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLD---WQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKS-------HISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQN 525          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.083e-33
Identity = 82/222 (36.94%), Postives = 124/222 (55.86%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGS-FKGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            +  + +KIAT +F   NRI     G VY+G  F G   AVK +         +  +EI ++  ++H N+++L G CV  G   LVYEF +N +L+  L   + +T   L W  R +I   VA  L YLH+ +    VH+++K +N+LLD  L  KI++FGLA+  E D          ++  + GT+GYMAPEY   G +T K DV++FG+V LE++ GR +
Sbjct:  612 FSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQ-ETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEED-------STHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSN 825          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PSYR1_ARATH9.351e-3437.33Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
CRK6_ARATH9.351e-3436.09Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK41_ARATH9.351e-3436.65Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK39_ARATH9.351e-3437.38Putative cysteine-rich receptor-like protein kinas... [more]
CRK31_ARATH9.351e-3435.14Putative cysteine-rich receptor-like protein kinas... [more]
SRF1_ARATH1.221e-3339.21Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
CRK5_ARATH1.221e-3336.94Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
WAKLF_ARATH1.595e-3338.12Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
CRK2_ARATH1.595e-3336.77Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y1534_ARATH2.083e-3336.94Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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