FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC2_XENLA (Tyrosine-protein kinase Src-2 OS=Xenopus laevis GN=src-B PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 66/212 (31.13%), Postives = 106/212 (50.00%), Query Frame = 1
Query:   28 DLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            +LK+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     RY     L   Q V +A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  269 ELKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGRY-----LRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 454          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC1_XENLA (Tyrosine-protein kinase Src-1 OS=Xenopus laevis GN=src-A PE=2 SV=4)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 66/212 (31.13%), Postives = 106/212 (50.00%), Query Frame = 1
Query:   28 DLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            +LK+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     RY     L   Q V +A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  269 ELKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYISKGSLLDFLKGEMGRY-----LRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 454          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: LCK_AOTNA (Proto-oncogene tyrosine-protein kinase LCK OS=Aotus nancymaae GN=LCK PE=2 SV=4)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 57/196 (29.08%), Postives = 104/196 (53.06%), Query Frame = 1
Query:   76 GSVYRGSFKGDD-AAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G V+ G +      AVK +K G +S     +E N++K++ H  ++RL      E   Y++ E+ +NG+L D+L +    +   LT  + + +A  +A  + ++ +     Y+H++L+ +NIL+   L  KI +FGLAR  E +E+   E   + ++ T          APE I  G  T K DV++FG+++ E+++
Sbjct:  257 GEVWMGYYNDHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTIKSDVWSFGILLTEIVT 435          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FYN_XIPHE (Proto-oncogene tyrosine-protein kinase Fyn OS=Xiphophorus helleri GN=fyn PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 73/232 (31.47%), Postives = 113/232 (48.71%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            ESL L K    ++  G F       G V+ G++ G    AVK +K    S      E  I+KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L     V +A  VA  + Y+ +     Y+H++L+++NIL+  NL  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++ GR    G  N
Sbjct:  269 ESLQLIK----RLGNGQF-------GEVWMGTWNGTTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 472          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR4_XENLA (Fibroblast growth factor receptor 4 OS=Xenopus laevis GN=fgfr4 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  115 AVKVMK--------GDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN-----------LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            AVK++K         D+ SE+ ++K I  H NII L G C  EG  +++ E+A  G L ++L + R  T ++           L++K  V  AY VA  + YL    +   +H++L   N+L+  +   KI +FGLAR   + D +++   G    +       +MAPE + + V T + D+++FGV+  E+ +
Sbjct:  524 AVKMLKDNGTDKDLSDLISEMELMKVIGKHKNIINLLGVCTQEGPLFVIVEYASKGNLREFLRARRPPTPEDAFDITKVPEELLSFKDLVSCAYQVARGMEYLE---SKRCIHRDLAARNVLVAEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVK-------WMAPEALFDRVYTHQSDIWSFGVLTWEIFT 707          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: DLK1_CAEBR (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis briggsae GN=dlk-1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 53/188 (28.19%), Postives = 90/188 (47.87%), Query Frame = 1
Query:   73 QGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLT-WKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            QG+V+ G ++    AVK +     +EI  L+ + H NII   G C       +V E+   G L   L      T    + W +      ++A+ ++YLH+      +H++LK+ NIL+      KI +FG +   + ++     +         GT  +MAPE I+      K+DV++FGVV+ E+L+
Sbjct:   73 QGAVFHGQYENRTVAVKKVNQLKETEIKHLRHLRHKNIIEFLGVCSKSPCYCIVMEYCPKGQLCTVLRQKNLITRQMFSDWVK------EIADGMHYLHQ---NKVIHRDLKSPNILISAEDSIKICDFGTSHLQKKNDSTMMSF--------CGTVSWMAPEMIKKEPCNEKVDVYSFGVVLWEMLT 243          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CSK_CHICK (Tyrosine-protein kinase CSK OS=Gallus gallus GN=CSK PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 55/192 (28.65%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   76 GSVYRGSFKGDDAAVKVMKGDVSS-----EINILKKINHSNIIRLSGFCVHE-GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G V  G ++G+  AVK +K D ++     E +++ ++ HSN+++L G  V E    Y+V E+   G+L D+L S        L     ++ + DV  A+ YL       +VH++L   N+L+  +  AK+++FGL + A S + + G   ++ T          APE +     + K DV++FG+++ E+ S
Sbjct:  207 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKSGLYIVTEYMAKGSLVDYLRSRGRSV---LGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNIAKVSDFGLTKEASSTQ-DTGKLPVKWT----------APEALREKKFSTKSDVWSFGILLWEIYS 381          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CLA4_CANAL (Serine/threonine-protein kinase CLA4 OS=Candida albicans GN=CLA4 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 51/218 (23.39%), Postives = 107/218 (49.08%), Query Frame = 1
Query:   40 ATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIR-LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGDQNCGAELLYAS 690
            A+G+      I+ +  + + K  D   +  K  + +EI ++K   H NI+  L  + + +   +++ E+   G+L++ + +N ++ ++    KQ   I ++    L +LHK      +H+++K+ N+LLD     KIT+FG         +++          +VGT  +MAPE ++      K+DV++ G++ +E++ G      ++   A  L A+
Sbjct:  690 ASGNVYLAEMIKDNNRKIAIKQMDLDAQPRKELIINEILVMKDSQHKNIVNFLDSYLIGDNELWVIMEYMQGGSLTEIIENNDFKLNE----KQIATICFETLKGLQHLHK---KHIIHRDIKSDNVLLDAYGNVKITDFGFCAKLTDQRNKRAT--------MVGTPYWMAPEVVKQKEYDEKVDVWSLGIMTIEMIEGEPPYLNEEPLKALYLIAT 892          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: YES_XIPHE (Tyrosine-protein kinase Yes OS=Xiphophorus helleri GN=yes PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 68/221 (30.77%), Postives = 110/221 (49.77%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            ESL L    D+++  G F       G V+ G++ G    A+K +K    S      E  I+KK+ H  ++ L    V E   Y+V EF   G+L D+L         +L   Q V +A  +A+ + ++ +     Y+H++L+ +NIL+  NL  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++
Sbjct:  276 ESLRL----DVRLGQGCF-------GEVWMGTWNGTTKVAIKTLKPGTMSPEAFLEEAQIMKKLRHDKLVPLYAV-VSEEPIYIVTEFMGKGSLLDFLKEG---DGKHLKLPQLVDMASQIADGMAFIERMN---YIHRDLRAANILVADNLVCKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVT 468          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC_RSVSA (Tyrosine-protein kinase transforming protein Src OS=Avian leukosis virus RSA GN=V-SRC PE=1 SV=5)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 67/219 (30.59%), Postives = 109/219 (49.77%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            ESL L    ++K+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L   Q V +A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  265 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 455          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRC2_XENLA1.270e-1431.13Tyrosine-protein kinase Src-2 OS=Xenopus laevis GN... [more]
SRC1_XENLA1.270e-1431.13Tyrosine-protein kinase Src-1 OS=Xenopus laevis GN... [more]
LCK_AOTNA1.270e-1429.08Proto-oncogene tyrosine-protein kinase LCK OS=Aotu... [more]
FYN_XIPHE1.270e-1431.47Proto-oncogene tyrosine-protein kinase Fyn OS=Xiph... [more]
FGFR4_XENLA1.270e-1429.90Fibroblast growth factor receptor 4 OS=Xenopus lae... [more]
DLK1_CAEBR1.270e-1428.19Mitogen-activated protein kinase kinase kinase dlk... [more]
CSK_CHICK1.270e-1428.65Tyrosine-protein kinase CSK OS=Gallus gallus GN=CS... [more]
CLA4_CANAL1.270e-1423.39Serine/threonine-protein kinase CLA4 OS=Candida al... [more]
YES_XIPHE1.658e-1430.77Tyrosine-protein kinase Yes OS=Xiphophorus helleri... [more]
SRC_RSVSA1.658e-1430.59Tyrosine-protein kinase transforming protein Src O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
back to top