FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC_RSVPA (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain PA101T) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 65/217 (29.95%), Postives = 108/217 (49.77%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH-EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            ESL L    ++K+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L   Q V++A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+  + G    +         + APE    G  T K DV++FG+++ EL
Sbjct:  262 ESLRL----EVKLGQGYF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAM-VSEEPIYIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVEMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARPGARFPVK--------WTAPEAALYGRFTIKSDVWSFGILLTEL 452          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC_CHICK (Proto-oncogene tyrosine-protein kinase Src OS=Gallus gallus GN=SRC PE=1 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 67/219 (30.59%), Postives = 109/219 (49.77%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            ESL L    ++K+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L   Q V +A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  265 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 455          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC_AVIST (Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain S2) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 67/219 (30.59%), Postives = 109/219 (49.77%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            ESL L    ++K+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L   Q V +A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  265 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 455          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC_AVISR (Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain rASV1441) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 67/219 (30.59%), Postives = 109/219 (49.77%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            ESL L    ++K+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L   Q V +A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  265 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 455          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC_AVIS2 (Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain PR2257) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 67/219 (30.59%), Postives = 109/219 (49.77%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            ESL L    ++K+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L   Q V +A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  265 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 455          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: RIPK3_HUMAN (Receptor-interacting serine/threonine-protein kinase 3 OS=Homo sapiens GN=RIPK3 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 59/199 (29.65%), Postives = 99/199 (49.75%), Query Frame = 1
Query:   76 GSVYRGSFK--GDDAAVKVMKGD-VSSEINILKKINHSNIIRLSGFCV-----HEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI--ENGVITPKLDVFAFGVVVLELLSGRE 642
            G+V+R   +  G D AVK++    +S E+  +  +++  ++RL G         +    LV +F +NG+LS  L S   +      W    ++  +V   + YLH   NP  +H++LK SN+LLD  L  K+ +FGL+      +   G      +    GT GY+APE     N   +   DV++FG+++  +L+GRE
Sbjct:   33 GTVFRAQHRKWGYDVAVKIVNSKAISREVKAMASLDNEFVLRLEGVIEKVNWDQDPKPALVTKFMENGSLSGLLQSQCPRP-----WPLLCRLLKEVVLGMFYLHDQ-NPVLLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSGTG------SGEPGGTLGYLAPELFVNVNRKASTASDVYSFGILMWAVLAGRE 219          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: LCK_SAISC (Proto-oncogene tyrosine-protein kinase LCK OS=Saimiri sciureus GN=LCK PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 58/196 (29.59%), Postives = 105/196 (53.57%), Query Frame = 1
Query:   76 GSVYRGSF-KGDDAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G V+ G + +    AVK +K G +S     +E N++K++ H  ++RL    V E   Y++ E+ +NG+L D+L +    +   LT  + + +A  +   + +L +     Y+H++L+ +NIL+   L  KI +FGLAR  E +E+   E   + ++ T          APE I  G  T K DV++FG+++ E+++
Sbjct:  257 GEVWMGYYNEHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHKRLVRLYAV-VTEEPIYIITEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIVEGMAFLEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTIKSDVWSFGILMTEIVT 435          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: GUC2G_MOUSE (Guanylate cyclase 2G OS=Mus musculus GN=Gucy2g PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 54/199 (27.14%), Postives = 98/199 (49.25%), Query Frame = 1
Query:   52 FSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE------NGVITPKLDVFAFGVVVLELL 630
            F+     QG+     + GD+A   V K  V  E+ ++ ++ H NI+   G C    N  +V ++   G+L D + ++ ++    + W  ++  AYD+ N L +LH   +P   H NLK SN L+D++++ K++ FGL             Y  + T H      + APE +       +G  TP+ DV++F +++ +L+
Sbjct:  571 FAPVGLYQGNQVALCYIGDEAEAWVKKPTVRREVCLMCELKHENIVPFFGVCTEPPNICIVTQYCKKGSLQDVMRNSDHE----IDWIFKLSFAYDIVNGLLFLH--GSPLRSHGNLKPSNCLVDSHMQLKLSGFGLWEFKHGSTWR--SYNQEATDH--SELYWTAPELLRLRESPCSG--TPQGDVYSFAILLRDLI 757          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR4_COTCO (Fibroblast growth factor receptor 4 OS=Coturnix coturnix GN=FGFR4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 60/193 (31.09%), Postives = 97/193 (50.26%), Query Frame = 1
Query:  115 AVKVMK--------GDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-----------NLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            AVK++K         D+ SE+ ++K ++ H NII L G C  +G  Y++ EFA  G L ++L + R  T D            L +K  V   Y VA  + YL    +   +H++L   N+L+      KI +FGLAR    D H+   Y  + T +      +MAPE + + V T + DV++FG+++ E+ +
Sbjct:  413 AVKMLKDNATDKDLADLISEMEMMKLMDKHKNIINLLGVCTQDGPLYVIVEFAAKGNLREYLRARRPPTPDYTFDITELHEEQLCFKDLVSCVYQVARGMEYLE---SRRCIHRDLAARNVLVTAENVMKIADFGLAR----DVHDIDYY--KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 596          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR3_HUMAN (Fibroblast growth factor receptor 3 OS=Homo sapiens GN=FGFR3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 1
Query:  106 DDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            DDA  K +  D+ SE+ ++K I  H NII L G C   G  Y++ E+A  G L ++L + R       + T     + LT+K  V  AY VA  + YL    +   +H++L   N+L+  +   KI +FGLAR    D H    Y  + T +      +MAPE + + V T + DV++FGV++ E+ +
Sbjct:  512 DDATDKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQGGPLYVLVEYAAKGNLREFLRARRPPGLDYSFDTCKPPEEQLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLAR----DVHNLDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 689          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRC_RSVPA1.658e-1429.95Tyrosine-protein kinase transforming protein Src O... [more]
SRC_CHICK1.658e-1430.59Proto-oncogene tyrosine-protein kinase Src OS=Gall... [more]
SRC_AVIST1.658e-1430.59Tyrosine-protein kinase transforming protein Src O... [more]
SRC_AVISR1.658e-1430.59Tyrosine-protein kinase transforming protein Src O... [more]
SRC_AVIS21.658e-1430.59Tyrosine-protein kinase transforming protein Src O... [more]
RIPK3_HUMAN1.658e-1429.65Receptor-interacting serine/threonine-protein kina... [more]
LCK_SAISC1.658e-1429.59Proto-oncogene tyrosine-protein kinase LCK OS=Saim... [more]
GUC2G_MOUSE1.658e-1427.14Guanylate cyclase 2G OS=Mus musculus GN=Gucy2g PE=... [more]
FGFR4_COTCO1.658e-1431.09Fibroblast growth factor receptor 4 OS=Coturnix co... [more]
FGFR3_HUMAN1.658e-1432.98Fibroblast growth factor receptor 3 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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