FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR1_CHICK (Basic fibroblast growth factor receptor 1 OS=Gallus gallus GN=FGFR1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 60/193 (31.09%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  115 AVKVMKGDVS--------SEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------YQTS----DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            AVK++K D +        SE+ ++K I  H NII L G C  +G  Y++ E+A  G L ++L + R       Y  +    + L++K  V  AY VA  + YL    +   +H++L   N+L+  +   KI +FGLAR    D H    Y  + T +      +MAPE + + + T + DV++FGV++ E+ +
Sbjct:  510 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGMEYCYNPTRIPEEQLSFKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 693          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CSK_BOVIN (Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 55/192 (28.65%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   76 GSVYRGSFKGDDAAVKVMKGDVSS-----EINILKKINHSNIIRLSGFCVHE-GNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G V  G ++G+  AVK +K D ++     E +++ ++ HSN+++L G  V E    Y+V E+   G+L D+L S        L     ++ + DV  A+ YL       +VH++L   N+L+  +  AK+++FGL + A S + + G   ++ T          APE +     + K DV++FG+++ E+ S
Sbjct:  207 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKSGLYIVTEYMAKGSLVDYLRSRGRSV---LGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----------APEALREKKFSTKSDVWSFGILLWEIYS 381          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CLA4_ASHGO (Serine/threonine-protein kinase CLA4 OS=Ashbya gossypii GN=CLA4 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 55/206 (26.70%), Postives = 101/206 (49.03%), Query Frame = 1
Query:  103 GDDAAVKVM-------KGDVSSEINILKKINHSNIIR-LSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN--LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGDQNCGAELLYAS 690
            GD  A+K M       K  + +EI ++K   H NI+  L  +   E + ++V E+ + G+L+D + ++    +    +T  Q   I  +    L +LH   +   +H+++K+ N+LLDT+ R KIT+FG          ++          +VGT  +MAPE ++      K+DV++ G++ +E+L G      ++   A  L A+
Sbjct:  539 GDKVAIKQMILSKQPRKELIVNEILVMKDSQHKNIVNFLEAYLKTEDDLWVVMEYMEGGSLTDVIENSIGSDASESPMTEPQIAYIVRETCQGLKFLH---DKHIIHRDIKSDNVLLDTHGRVKITDFGFCAKLTDKRSKRA--------TMVGTPYWMAPEVVKQREYDEKVDVWSLGIMTIEMLEGEPPYLNEEPLKALYLIAT 733          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y4312_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana GN=At4g31250 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 50/197 (25.38%), Postives = 94/197 (47.72%), Query Frame = 1
Query:   76 GSVYRGSFKGDDAAV--------KVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHK-YTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            GS Y+ +     A V         + + +    +  + +++H N++ L  F   +    LV  +  NG+L++ LH+NR      L W  R++I   V   L YL++ + +    H +LK+SN+LLD N    +T++ L      D+ +Q                Y APE+ +    + + DV++ G+++LE+L+G+
Sbjct:  378 GSSYKAALSSGRAVVVKRFRFMSNIGREEFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHANRTPGQVVLDWPIRLKIVRGVTRGLAYLYRVFPDLNLPHGHLKSSNVLLDPNFEPLLTDYALVPVVNRDQSQQ------------FMVAYKAPEFTQQDRTSRRSDVWSLGILILEILTGK 562          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y4251_DICDI (Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum GN=DDB_G0284251 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 58/205 (28.29%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   22 FQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 636
            F+ L   TG F    +I  +      K D+++++ +KG    E+ IL K+ H+NI+++ G    +     + E+ +NG+L D +     +    L+ +  +   Y +   L YLH   +   +H+++K SNIL+      K+ +FG+A   +S+         QL   VVGT  +MAPE IE    +   D+++ G  ++ELL+G
Sbjct:   51 FKGLNGKTGEFVAIKQIDSN------KIDESSLQSVKG----EVEILHKLRHNNIVKVLGVVEVQAQLNFILEYVENGSLRDVI-----EKFGPLSEELCIIYLYQMLQGLAYLH---SNKVIHRDIKASNILITKEGVIKLADFGVASQIDSES--------QLRFSVVGTPYWMAPESIEISGCSSASDIWSLGSTMIELLTG 229          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC_RSVH1 (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain H-19) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 67/219 (30.59%), Postives = 108/219 (49.32%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            ESL L    + K+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L   Q V +A  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  265 ESLRL----EAKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 455          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SHKE_DICDI (Dual specificity protein kinase shkE OS=Dictyostelium discoideum GN=shkE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 55/198 (27.78%), Postives = 95/198 (47.98%), Query Frame = 1
Query:   76 GSVYRGSFKGDDAAVKVMKGDVSSE---------INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 642
            G VY+ + +G   AVKV K    SE         + I+K+I H N++   G C   G   +V E      L   +HS+  +        +R+++  D A  +N+LH   N   +H++LK +N+++  +   KI +FG ++  ++      G  L   +   GT  YMAPE +       K DV++FG+++ E+ +  E
Sbjct:  249 GKVYKATCRGKKVAVKVPKKQTLSESELKSFKNEVEIMKQIFHPNVVLCLGACTKPGKVMIVSELMQTD-LEKLIHSSEVEPPPLY---ERMKMCLDAALGINWLHGICN--IIHRDLKLANLMISKDKTVKIGDFGFSQVIKT------GTTLSDQKGPKGTALYMAPEVMMKHEFNEKADVYSFGLILYEMATCEE 434          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: KSYK_PIG (Tyrosine-protein kinase SYK OS=Sus scrofa GN=SYK PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 57/216 (26.39%), Postives = 110/216 (50.93%), Query Frame = 1
Query:   13 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVS---------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            L   +D ++ +G+F     ++   Y+        AVK++K + +         +E N+++++++  I+R+ G C  E +  LV E A+ G L+ +L  NR+    N+     +++ + V+  + YL +     +VH++L   N+LL T   AKI++FGL+++  +DE+       +   H      + APE I     + K DV++FGV++ E  S
Sbjct:  362 LLTLEDKELGSGNFGT---VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEECN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 560          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: KSYK_HUMAN (Tyrosine-protein kinase SYK OS=Homo sapiens GN=SYK PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 57/216 (26.39%), Postives = 110/216 (50.93%), Query Frame = 1
Query:   13 LYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVS---------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            L   +D ++ +G+F     ++   Y+        AVK++K + +         +E N+++++++  I+R+ G C  E +  LV E A+ G L+ +L  NR+    N+     +++ + V+  + YL +     +VH++L   N+LL T   AKI++FGL+++  +DE+       +   H      + APE I     + K DV++FGV++ E  S
Sbjct:  369 LLTLEDKELGSGNFGT---VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: IGF1R_RAT (Insulin-like growth factor 1 receptor OS=Rattus norvegicus GN=Igf1r PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 57/205 (27.80%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   76 GSVYRGSFKG---------------DDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            G VY G  KG               ++AA    + +  +E +++K+ N  +++RL G       T ++ E    G L  +L S R +  +NL     +  + +Q+A ++A+ + YL+      +VH++L   N ++  +   KI +FG+ R   E+D + +GG GL   R       +M+PE +++GV T   DV++FGVV+ E+
Sbjct: 1012 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEVENNLVLIPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMSPESLKDGVFTTHSDVWSFGVVLWEI 1206          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FGFR1_CHICK1.658e-1431.09Basic fibroblast growth factor receptor 1 OS=Gallu... [more]
CSK_BOVIN1.658e-1428.65Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK P... [more]
CLA4_ASHGO1.658e-1426.70Serine/threonine-protein kinase CLA4 OS=Ashbya gos... [more]
Y4312_ARATH2.166e-1425.38Probable LRR receptor-like serine/threonine-protei... [more]
Y4251_DICDI2.166e-1428.29Probable serine/threonine-protein kinase DDB_G0284... [more]
SRC_RSVH12.166e-1430.59Tyrosine-protein kinase transforming protein Src O... [more]
SHKE_DICDI2.166e-1427.78Dual specificity protein kinase shkE OS=Dictyostel... [more]
KSYK_PIG2.166e-1426.39Tyrosine-protein kinase SYK OS=Sus scrofa GN=SYK P... [more]
KSYK_HUMAN2.166e-1426.39Tyrosine-protein kinase SYK OS=Homo sapiens GN=SYK... [more]
IGF1R_RAT2.166e-1427.80Insulin-like growth factor 1 receptor OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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