FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: YES_AVISY (Tyrosine-protein kinase transforming protein Yes (Fragment) OS=Avian sarcoma virus (strain Y73) GN=V-YES PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVS------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            ESL L    ++K+  G F       G V+ G++ G    A+K +K           E  I+KK+ H  ++ L    V E   Y+V EF   G+L D+L     +    L   Q V +A  +A+ + Y+ +     Y+H++L+ +NIL+  NL  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++
Sbjct:  265 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTKVAIKTLKLGTMMPEAFLQEAQIMKKLRHDKLVPLYAV-VSEEPIYIVTEFMTKGSLLDFLKEGEGKF---LKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVT 457          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRK3_SPOLA (Tyrosine-protein kinase SRK3 (Fragment) OS=Spongilla lacustris GN=SRK3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 62/218 (28.44%), Postives = 107/218 (49.08%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDDA-AVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            K+  G+F       G V+ G + G  A AVK +K D         E  ++KKI+H N+++L   C      Y+V E    G++ ++L   ++    N+T  Q V ++  +A+ + YL  ++   Y+H++L   NIL+      K+ +FGLAR  + D +       + T+  +    + APE       T K DV++FGV++ E+++ GR    G  N
Sbjct:   71 KLGQGNF-------GEVWAGVWNGTTAVAVKTLKPDTMEVKDFVQEAQVMKKIHHPNLLQLYAVCTIGEPIYIVTELMKYGSMLEYL---KHGEGKNITLHQMVDMSAQIASGMTYLEAHS---YIHRDLAARNILVGEGNVCKVADFGLARVIKEDIYNP----REGTKFPI---KWTAPEAALYNRFTIKSDVWSFGVLISEIVTHGRMPYPGMTN 268          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: PRKC_BACSU (Serine/threonine-protein kinase prkC OS=Bacillus subtilis GN=prkC PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 48/193 (24.87%), Postives = 98/193 (50.78%), Query Frame = 1
Query:  109 DAAVKVMKGDVSSEINILKK----------INHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGD 657
            + A+K+++ D +++   +++          ++H NI+ +      +   Y+V E+ +   L +++ +N       L  K+ + I   + +A+ + H+      VH+++K  NIL+D     K+T+FG+A +  S         +  T  V+G+  Y++PE    G+ T K D++A G+V+ ELL+GR    G+
Sbjct:   36 EVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEEDDIYYIVMEYVEGMTLKEYITAN-----GPLHPKEALNIMEQIVSAIAHAHQNQ---IVHRDIKPHNILIDHMGNIKVTDFGIATALSSTT-------ITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGE 213          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: PATS1_DICDI (Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum GN=pats1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 62/215 (28.84%), Postives = 107/215 (49.77%), Query Frame = 1
Query:   82 VYRGSFKGDDAAVKVMKG----DVSSEIN----------------ILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL-----DTNLRAKITNFGLARSAESDEHEQGGYGLQ--LTRHVVGTYGYMAPEYI-ENGVITPKLDVFAFGVVVLELLSGRE 642
            VYR  ++G   AVK +K     D   EIN                ++ ++ H NI++L G C+      +V E+  +G L  +LH    + S    W  R+++A D+++ + +LH  T PP +H++LK+ NILL     +    AK+ +FGL+             GLQ  +T   V    ++APE + +    + + DV+AFGV++ EL++ ++
Sbjct: 2261 VYRARWQGQTVAVKKLKTIENLDSPIEINDISLSKAFNEFRRECWVMSELEHPNIVQLKGLCLDP--LCIVTEYLPHGNLYSFLHKPEMEFS----WLFRLKVALDISSGMAFLHSST-PPIIHRDLKSPNILLASINENAQTIAKVVDFGLS-------------GLQHTITNRGVENPLWLAPEILNKTKEASTQTDVYAFGVILWELVTRKD 2455          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: KPSH2_HUMAN (Serine/threonine-protein kinase H2 OS=Homo sapiens GN=PSKH2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 64/210 (30.48%), Postives = 97/210 (46.19%), Query Frame = 1
Query:   37 IATGSFSEENRIQGSVYRGSFKGDDAAVKVM-------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILL---DTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 636
            I TGSFS   R++    +  F     A+KVM       +    SE+++L++++H  I++L      E   Y+V E A  G L D     R     + T +  V+I   VA+ + YLH        H+NLK  N+L        +  IT+FGLA S +         G    + + GT  Y+APE +     T  +D++A GV+   LLSG
Sbjct:   69 IGTGSFSRVVRVEQKTTKKPF-----AIKVMETREREGREACVSELSVLRRVSHRYIVQLMEIFETEDQVYMVMELATGGELFD-----RLIAQGSFTERDAVRILQMVADGIRYLHAL---QITHRNLKPENLLYYHPGEESKILITDFGLAYSGKKS-------GDWTMKTLCGTPEYIAPEVLLRKPYTSAVDMWALGVITYALLSG 258          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: INSR_HUMAN (Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 66/232 (28.45%), Postives = 114/232 (49.14%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGS----FKGDD---AAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL-----TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSA-ESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            E +TL +    ++  GSF       G VY G+     KG+     AVK +    S        +E +++K     +++RL G       T +V E   +G L  +L S R +  +N      T ++ +Q+A ++A+ + YL+      +VH++L   N ++  +   KI +FG+ R   E+D + +GG GL   R       +MAPE +++GV T   D+++FGVV+ E+ S
Sbjct: 1021 EKITLLR----ELGQGSF-------GMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 1231          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: HCK_HUMAN (Tyrosine-protein kinase HCK OS=Homo sapiens GN=HCK PE=1 SV=5)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 67/232 (28.88%), Postives = 114/232 (49.14%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSF-KGDDAAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            ESL L K    K+  G F       G V+  ++ K    AVK MK G +S     +E N++K + H  +++L      E   Y++ EF   G+L D+L S+           + +  +  +A  + ++ +     Y+H++L+ +NIL+  +L  KI +FGLAR  E +E+   E   + ++ T          APE I  G  T K DV++FG++++E+++ GR    G  N
Sbjct:  260 ESLKLEK----KLGAGQF-------GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT----------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 463          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGR1A_DANRE (Basic fibroblast growth factor receptor 1-A OS=Danio rerio GN=fgfr1a PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 61/193 (31.61%), Postives = 97/193 (50.26%), Query Frame = 1
Query:  115 AVKVMKGDVS--------SEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------YQTS----DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            AVK++K D +        SE+ ++K I  H NII L G C  +G  Y++ EFA  G L ++L   R       Y       +N++ K  V  AY VA  + YL    +   +H++L   N+L+  +   KI +FGLAR    D H    Y  + T +      +MAPE + + + T + DV++FGV++ E+ +
Sbjct:  499 AVKMLKSDATEKDLSDLISEMEMMKIIGKHKNIINLLGACTQDGPLYVIVEFAAKGNLREYLRVRRPPGMEYCYNPDQVPVENMSIKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 682          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR3_DANRE (Fibroblast growth factor receptor 3 OS=Danio rerio GN=fgfr3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 57/193 (29.53%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  115 AVKVMK--------GDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------YQT----SDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            AVK++K         D+ SE+ ++K I  H NII L G C  +G  Y++ E+A  G L ++L + R       + T    ++ LT+K  V  AY VA  + YL    +   +H++    N+L+  +   KI +FGLAR   + ++ +     +L         +MAPE + + V T + DV+++GV++ E+ +
Sbjct:  494 AVKMLKDDGTDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKIPNETLTFKDLVSCAYQVARGMEYL---ASKKCIHRDPAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSYGVLLWEIFT 677          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FER_RAT (Proto-oncogene tyrosine-protein kinase Fer (Fragment) OS=Rattus norvegicus GN=Fer PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 55/195 (28.21%), Postives = 90/195 (46.15%), Query Frame = 1
Query:   76 GSVYRGSFKGDD-AAVKVMKGDVSSEINI--------LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G VY+G+ K     AVK  K D+  E+ I        LK+ +H NI++L G C      Y++ E    G    +L   +    D L  KQ V+ + DVA  + YL        +H++L   N L+  N   KI++FG++R  +   +   G      +       + APE +  G  + + DV++FG+++ E  S
Sbjct:   76 GEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLSFLRKRK----DELKLKQLVRFSLDVAAGMLYLE---GKNCIHRDLAARNCLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIK-------WTAPEALNYGRYSSESDVWSFGILLWETFS 256          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YES_AVISY6.302e-1430.77Tyrosine-protein kinase transforming protein Yes (... [more]
SRK3_SPOLA6.302e-1428.44Tyrosine-protein kinase SRK3 (Fragment) OS=Spongil... [more]
PRKC_BACSU6.302e-1424.87Serine/threonine-protein kinase prkC OS=Bacillus s... [more]
PATS1_DICDI6.302e-1428.84Probable serine/threonine-protein kinase pats1 OS=... [more]
KPSH2_HUMAN6.302e-1430.48Serine/threonine-protein kinase H2 OS=Homo sapiens... [more]
INSR_HUMAN6.302e-1428.45Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=3[more]
HCK_HUMAN6.302e-1428.88Tyrosine-protein kinase HCK OS=Homo sapiens GN=HCK... [more]
FGR1A_DANRE6.302e-1431.61Basic fibroblast growth factor receptor 1-A OS=Dan... [more]
FGFR3_DANRE6.302e-1429.53Fibroblast growth factor receptor 3 OS=Danio rerio... [more]
FER_RAT6.302e-1428.21Proto-oncogene tyrosine-protein kinase Fer (Fragme... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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