FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32
Identity = 80/225 (35.56%), Postives = 128/225 (56.89%), Query Frame = 1
Query:   13 LYKFQDLKIATGSFSEENRI-QGS---VYRGSFK-GDDAAVK--VMKGDVS-------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            ++ +++L+ A   F EE+ + +GS   VY+G  + G   AVK  +M  D         +E+++L ++NH++++ L G+C   G   LVYEF  +G+L + LH       + L W +RV IA   A  + YLH Y  PP +H+++K+SNIL+D    A++ +FGL+     D       G  L     GT GY+ PEY     +T K DV++FGV++LE+LSGR++
Sbjct:  499 VFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDS------GSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKA 717          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.350e-32
Identity = 86/229 (37.55%), Postives = 133/229 (58.08%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRI-----QGSVYRGSF-KGDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN--LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 642
            +S  ++  ++L+ AT +F+  NR+     QG+VY+G    G   AVK  K        +  +E+ +L +INH NI++L G C+      LVYE   NG L   LH +    SD+  +TW  R++I+ ++A AL YLH   + P  H+++KT+NILLD   RAK+++FG +RS   D+         LT  V GT+GY+ PEY +    T K DV++FGVV++EL++G +
Sbjct:  404 QSSKIFSSKELEKATDNFNM-NRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHD----SDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQ-------THLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEK 620          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1
Query:   37 IATGSFSEENRIQ----GSVYRGSF-KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            IAT  FS EN++     GSVY+G    G + AVK + G       +  +E+ +L ++ H N+++L GFC       LVYE   N +L  ++     +    LTW  R +I   VA  L YLH+ +    +H++LK SNILLD  +  K+ +FG+AR    DE          T  VVGTYGYMAPEY+ +G  + K DV++FGV++LE++SG ++
Sbjct:  335 IATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWL--LTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGE------TSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKN 541          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32
Identity = 76/225 (33.78%), Postives = 127/225 (56.44%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRI----QGSVYRGSFKGDDAAVK-------------VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            +K+QD+  +T  F   + I       VYR + +    AVK             V+K +  +E+  L +I H N+++L GFC H  +T+L+YE+ + G+L+  L ++  + +  LTW +R+ +   VA+AL+Y+H     P VH+++ + NILLD +  AKI++FG A+  ++D              V GTYGY+APE+     +T K DV++FGV++LEL+ G+
Sbjct:  839 FKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQDTIIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLAND--EEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSA--------VAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGK 1053          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.008e-32
Identity = 74/223 (33.18%), Postives = 130/223 (58.30%), Query Frame = 1
Query:    4 SLTLYKFQDLKIATGSFSEENRI----QGSVYRGSFKGDD-AAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 636
            S+  + +++++ AT  FSE+ ++     G+VYRG  + D+  A+K ++         V +EI +L  ++H N++RL G C+ +G+  LVYE+  NG LS+ L  +R      L W  R+ +A   A A+ YLH   NPP  H+++K++NILLD +  +K+ +FGL+R   ++          ++    GT GY+ P+Y +   ++ K DV++FGVV+ E+++G
Sbjct:  332 SVAFFPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDR---GSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESS-------HISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITG 544          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.008e-32
Identity = 80/222 (36.04%), Postives = 123/222 (55.41%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGSFK-GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            + F+ ++ AT  FS+ N I     G VYRG    G + AVK +         +  +E  ++ K+ H N++RL GFC+      LVYEF  N +L  +L     Q    L W +R  I   +A  + YLH+ +    +H++LK SNILLD ++  KI +FG+AR    D+ +        TR + GT+GYM+PEY   G  + K DV++FGV+VLE++SG+++
Sbjct:  333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQ--GELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQAN------TRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKN 546          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32
Identity = 79/220 (35.91%), Postives = 124/220 (56.36%), Query Frame = 1
Query:   13 LYKFQDLKIATGSFSEE--NRIQGSVYRGSFK-GDDAAVKVM-------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 642
            ++  +++K AT +F E       G+VYRG    G   AVKV             +E+++L +I H N++   GFC       LVYE+   G+L+D L+  R +   +L W  R+++A D A  L+YLH  + P  +H+++K+SNILLD ++ AK+++FGL++     +         +T  V GT GY+ PEY     +T K DV++FGVV+LEL+ GRE
Sbjct:  595 IFSHKEIKSATRNFKEVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRH-SLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKAD------ASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGRE 807          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32
Identity = 86/224 (38.39%), Postives = 129/224 (57.59%), Query Frame = 1
Query:   13 LYKFQDLKIATGSFSEENRI----QGSVYRGSF-KGDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN--LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 642
            L+  ++LK AT +FS +  +    QG+VY+G    G   AVK  K           +EI +L +INH NI++L G C+      LVYE+  NG +   LH      SD+  +TW+ R++IA ++A AL Y+H   + P  H+++KT+NILLD    AK+++FG +RS   D+         LT  V GT+GYM PEY  +   T K DV++FGVV++EL++G +
Sbjct:  419 LFSSEELKKATDNFSVKRVLGKGSQGTVYKGMMVDGKIIAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDE----SDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQ-------THLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEK 631          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32
Identity = 85/226 (37.61%), Postives = 130/226 (57.52%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRI----QGSVYRGSF-KGDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 642
            E   ++  ++L+ AT +FS +  +    QG+VY+     G   AVK  K        +  +EI +L +INH NI++L G C+      LVYE+  NG L   LH         +TW+ R++IA ++A AL+Y+H   + P  H+++KT+NILLD   RAKI++FG +RS  +D+         LT  V GT+GYM PEY  +   T K DV++FGVV++EL++G +
Sbjct:  411 EMSKIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDE--YDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQ-------THLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEK 627          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32
Identity = 85/227 (37.44%), Postives = 131/227 (57.71%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRI-----QGSVYRGSF-KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNL-TWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            E   ++   +L+ AT +F+  NR+     QG+VY+G    G   AVK  K        +  +E+ +L +INH NI++L G C+      LVYEF  NG L   L   R +  D + TW+ R+ IA ++A AL+YLH   + P  H+++KT+NILLD   + K+++FG +RS   D+         LT  V GT+GY+ PEY ++   T K DV++FGVV++EL++G+
Sbjct:  407 EMSKIFSSNELEKATDNFNT-NRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRL---RDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQ-------THLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGK 622          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ACR4_ARATH1.034e-3235.56Serine/threonine-protein kinase-like protein ACR4 ... [more]
WAKLI_ARATH1.350e-3237.55Wall-associated receptor kinase-like 22 OS=Arabido... [more]
CRK36_ARATH1.764e-3238.14Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y1571_ARATH2.303e-3233.78Probable leucine-rich repeat receptor-like protein... [more]
WAKLO_ARATH3.008e-3233.18Wall-associated receptor kinase-like 14 OS=Arabido... [more]
CRK35_ARATH3.008e-3236.04Putative cysteine-rich receptor-like protein kinas... [more]
Y5487_ARATH3.929e-3235.91Probable LRR receptor-like serine/threonine-protei... [more]
WAKLE_ARATH3.929e-3238.39Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
WAKLC_ARATH3.929e-3237.61Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
WAKLD_ARATH5.131e-3237.44Wall-associated receptor kinase-like 4 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
back to top