FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.409e-31
Identity = 79/219 (36.07%), Postives = 120/219 (54.79%), Query Frame = 1
Query:   22 FQDLKIATGSFSEENRIQ----GSVYRGSFKGDDAAVKVMKG---------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            F +L+  T +F     I     G V+RGS K D+  V V +G         +  SEI IL KI H +++ L G+C  +    LVYE+ D G L   L+ +   T+  L+WKQR+++    A  L+YLH  ++   +H+++K++NILLD N  AK+ +FGL+RS    +      G      V G++GY+ PEY     +T K DV++FGVV+ E+L  R
Sbjct:  479 FAELQSGTNNFDRSLVIGVGGFGMVFRGSLK-DNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGS---TNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTG------VKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCAR 687          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.677e-31
Identity = 81/222 (36.49%), Postives = 126/222 (56.76%), Query Frame = 1
Query:   19 KFQDLKIATGSFSEENRIQGS-----VYRGSFKG---DDAAVKV-----MKG--DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            +++DL  AT  F +ENRI G+     V+RG+      D  AVK      M+G  +  +EI  L ++ H N++ L G+C  + +  L+Y++  NG+L   L+S   Q+   L+W  R +IA  +A+ L YLH+      +H+++K SN+L++ ++  ++ +FGLAR  E             T  VVGT GYMAPE   NG  +   DVFAFGV++LE++SGR
Sbjct:  350 RYKDLYAATDGF-KENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSN-------TTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGR 563          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.677e-31
Identity = 76/200 (38.00%), Postives = 116/200 (58.00%), Query Frame = 1
Query:   76 GSVYRGSFK-GDDAAVKVMKGDVS----------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            G VYR   K G   AVK + G+            SE+  L ++ H NI++L   C  E   +LVYEF +NG+L D LHS + ++    L W  R  IA   A  L+YLH  + PP VH+++K++NILLD  ++ ++ +FGLA+  + ++++  G        V G+YGY+APEY     +  K DV++FGVV+LEL++G+
Sbjct:  698 GLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDND--GVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGK 895          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30
Identity = 81/233 (34.76%), Postives = 125/233 (53.65%), Query Frame = 1
Query:    4 SLTLYKFQDLKIATGSFSEENRIQ----GSVYRG---------SFKGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 636
            +L +Y F DLK AT +F  ++ +     G VYRG         S  G    V + +          +  SE+N L  ++H N+++L G+C  +    LVYEF   G+L     S+ ++ +D   W  R++I    A  L +LH       ++++ K SNILLD+N  AK+++FGLA+   +DE         +T  ++GTYGY APEY+  G +  K DVFAFGVV+LE+++G
Sbjct:   70 NLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLE----SHLFRRNDPFPWDLRIKIVIGAARGLAFLHSLQRE-VIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSH------VTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTG 291          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30
Identity = 77/231 (33.33%), Postives = 128/231 (55.41%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGSF-KGDDAAVKVM-------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGDQNCGA 672
            + F+ +K AT +F + N++     G+VY+G F  G + A K +       + +  +E+ ++ ++ H N++ L GF V      LVYEF  N +L  +L     +    L W +R  I   +   + YLH+ +    +H++LK SNILLD  +  KI +FGLAR+   ++ E        T  VVGT+GYM PEY+ NG  + K DV++FGV++LE++ G+++ +  Q  G+
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQ--LDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEAN------TGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGS 573          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30
Identity = 77/222 (34.68%), Postives = 126/222 (56.76%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGSFK-GDDAAVKVM-------KGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            + F+ ++ AT  F   N++     G VY+G+   G   AVK +       + +  +E+ ++ K+ H N+++L G+C+      LVYEF  N +L  +L  +  +    L W +R +I   +A  + YLH+ +    +H++LK  NILLD ++  KI +FG+AR    D+ E       +TR VVGTYGYM+PEY   G  + K DV++FGV+VLE++SG ++
Sbjct:  314 FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMK--LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEA------MTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKN 527          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30
Identity = 81/225 (36.00%), Postives = 123/225 (54.67%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQG-----SVYRGSFKGDDAAVKVMKGDVSSE---------INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD---NLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            + F +L+ AT +F +EN + G      VY G   G    V + +G  SSE         I +L K+ H +++ L GFC       LVYE+  NG L D L+ ++    +    L+WKQR++I    A  L+YLH       +H+++KT+NILLD NL AK+++FGL++ A  DE         ++  V G++GY+ PEY     +T K DV++FGVV+ E+L  R
Sbjct:  513 FPFTELQTATQNF-DENAVCGVGGFGKVYIGEIDGG-TQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEG-------HVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCAR 728          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30
Identity = 83/226 (36.73%), Postives = 129/226 (57.08%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRI----QGSVYRGSFKGDDAAVKVMKGDVSS-------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN----LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESD-EHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            ++++++  AT SFS+E +I     GSVYR +      AVKV+  D SS       E+ IL KI H +++ L G C   G+  LVYE+  NG+L + L   R          L W +R +IA+++A+AL +LH     P VH++LK +NILLD N  +KI + GL++    D  H    +        VGT+ Y+ PEY   GV+TP+ D++AFG+++L+L++ R +
Sbjct:  417 FEWEEIVEATSSFSDELKIGVGGYGSVYRCNLHHTTVAVKVLHSDKSSLTKQFHQELEILSKIRHPHLLLLLGACPERGS--LVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFN---ETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTARSA 637          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30
Identity = 76/222 (34.23%), Postives = 122/222 (54.95%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGSFK-GDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            +  + +K AT +F  EN+I     G VY+G    G   AVK +         +  +EI ++  + H N+++L G C+      LVYE+ +N +L+  L     Q   +L W  R ++   +A  L YLH+ +    VH+++K +N+LLD +L AKI++FGLA+  E +          ++  + GT GYMAPEY   G +T K DV++FGVV LE++SG+ +
Sbjct:  655 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRL-HLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEE-------NTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSN 868          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30
Identity = 76/222 (34.23%), Postives = 119/222 (53.60%), Query Frame = 1
Query:   16 YKFQDLKIATGSFSEENRIQ----GSVYRGSF-KGDDAAVKVMKG-------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRES 645
            +  + +K AT +F    +I     GSVY+G   +G   AVK +         +  +EI ++  + H N+++L G CV      LVYE+ +N  LS  L      +   L W  R +I   +A  L +LH+ +    VH+++K SN+LLD +L AKI++FGLA+  +            ++  + GT GYMAPEY   G +T K DV++FGVV LE++SG+ +
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDG-------NTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSN 880          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5241_ARATH7.409e-3136.07Probable receptor-like protein kinase At5g24010 OS... [more]
LRKA2_ARATH9.677e-3136.49Lectin-domain containing receptor kinase A4.2 OS=A... [more]
HSL2_ARATH9.677e-3138.00LRR receptor-like serine/threonine-protein kinase ... [more]
CX32_ARATH1.264e-3034.76Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK21_ARATH1.264e-3033.33Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK19_ARATH1.264e-3034.68Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y5613_ARATH1.651e-3036.00Probable receptor-like protein kinase At5g61350 OS... [more]
PUB51_ARATH1.651e-3036.73U-box domain-containing protein 51 OS=Arabidopsis ... [more]
Y5344_ARATH2.156e-3034.23Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH2.156e-3034.23Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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