FC923103

Overview
NameFC923103
Unique NameFC923103
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14385 contig Ccv1_Contig14385:1..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST3A1_RABIT (Amine sulfotransferase OS=Oryctolagus cuniculus GN=SULT3A1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  286 FQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLYVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHFTTS*DPKKGYNSLEELLIGF 693
            F+ +D D+ ++T PK+GT W + I   I     Y +   N     +   + VPF+E  +    +  D+    SPRLFA+HLP+   P S+K++ +  K++Y+ RNPKD+ +S +HF+      +  N+LE  +  F
Sbjct:   32 FEIRDDDVFVITYPKSGTVWTQQILSLI-----YFEGHRNRTEKWDTL-DRVPFLEYNI----RKVDIENRPSPRLFASHLPYYLAPKSLKNNKA--KIIYVYRNPKDVLISFFHFSNMVVKLEASNTLENFMEKF 155          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST3A1_MOUSE (Amine sulfotransferase OS=Mus musculus GN=Sult3a1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 38/124 (30.65%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIV-----NRLRYVDNPCNHPLLTNNPHELVPFIELKLYVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHFT 636
            ++++ +D DI +VT PK+GT W + I   I      NR   ++     P    N H+L               D   + SPR+F++H+P+  +P  +KD  +  K++Y+ RNPKD+ +S +HF+
Sbjct:   30 ENYEIRDDDIFIVTYPKSGTIWTQQILSLIYFEGHRNRTENIETIDRAPFFEYNIHKL---------------DYAKMPSPRIFSSHIPYYLVPKGLKDKKA--KILYMYRNPKDVLISYFHFS 136          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1E1_MOUSE (Estrogen sulfotransferase, testis isoform OS=Mus musculus GN=Sult1e1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12
Identity = 45/140 (32.14%), Postives = 73/140 (52.14%), Query Frame = 1
Query:  286 FQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLY-VDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF----TTS*DPKKGYNSLEELLIG 690
            F A+  D+++ T PK+GTTW+  + + I          C    + N     +P++E +   + N +  L    SPR+  THLP   LPAS  + +  CK++YLCRN KD+ VS ++F    T+  +PK     +E+ + G
Sbjct:   34 FLARPDDLVIATYPKSGTTWISEVVYMIYKEGDV--EKCKEDAIFNR----IPYLECRNEDLINGIKQLKEKESPRIVKTHLPPKLLPASFWEKN--CKMIYLCRNAKDVAVSYYYFLLMITSYPNPKSFSEFVEKFMQG 165          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1E1_BOVIN (Estrogen sulfotransferase OS=Bos taurus GN=SULT1E1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12
Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKL-YVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF----TTS*DPKKGYNSLEELLIG 690
            + F+A+  D+++VT PK+GTTWL  I   I N        C   ++ N     VP++E    +V   V  L  + SPR+  +HLP   LP S  + +  CK++YL RN KD+ VS +      T   DP    + +E+ + G
Sbjct:   32 EEFEARPDDLVIVTYPKSGTTWLSEIICMIYNNGDV--EKCKEDVIFNR----VPYLECSTEHVMKGVKQLNEMASPRIVKSHLPVKLLPVSFWEKN--CKIIYLSRNAKDVVVSYYFLILMVTAIPDPDSFQDFVEKFMDG 165          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1C3_HUMAN (Sulfotransferase 1C3 OS=Homo sapiens GN=SULT1C3 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12
Identity = 47/120 (39.17%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  283 HFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLYVDNQVPDL---TTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            +FQA+  D++L T PK+GTTW+  I   I+N     D        T + H    F+ELK +   + PDL     ++SP+L  THLP   +P S+   +  CK+VY+ RNPKD  VS +HF
Sbjct:   41 NFQAKPDDLILATYPKSGTTWMHEILDMILND---GDVEKCKRAQTLDRH---AFLELK-FPHKEKPDLEFVLEMSSPQLIKTHLPSHLIPPSIWKEN--CKIVYVARNPKDCLVSYYHF 151          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1B1_MOUSE (Sulfotransferase family cytosolic 1B member 1 OS=Mus musculus GN=Sult1b1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKL--YVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            + FQ+   DI++ T PK+GTTWL  I   ++N        C   ++T+     VP +EL +     + V  L    SPR+  THLP   LP S  ++   CK++YL RN KD+ VS +HF
Sbjct:   32 EEFQSTPGDIVITTYPKSGTTWLSEIVDMVLNDGNV--EKCKRDVITSK----VPMLELSVPGIRISGVELLKKTPSPRIIKTHLPIDLLPKSFWENK--CKMIYLARNGKDVAVSYYHF 143          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1E6_RAT (Estrogen sulfotransferase, isoform 6 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 1
Query:  286 FQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLY-VDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            F A+  D+L+VT PK+G+TW+  I   I          C    + N     +P++E +   + N +  L    SPR+  THLP   LPAS  + +  CK++YLCRN KD+ VS ++F
Sbjct:   34 FSARPDDLLVVTYPKSGSTWIGEIVDMIYKEGDV--EKCKEDAIFNR----IPYLECRNEDLINGIKQLKEKESPRIVKTHLPAKLLPASFWEKN--CKIIYLCRNAKDVVVSYYYF 142          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1E2_RAT (Estrogen sulfotransferase, isoform 2 OS=Rattus norvegicus GN=Ste2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 1
Query:  286 FQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLY-VDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            F A+  D+L+VT PK+G+TW+  I   I          C    + N     +P++E +   + N +  L    SPR+  THLP   LPAS  + +  CK++YLCRN KD+ VS ++F
Sbjct:   34 FSARPDDLLVVTYPKSGSTWIGEIVDMIYKEGDV--EKCKEDAIFNR----IPYLECRNEDLINGIKQLKEKESPRIVKTHLPAKLLPASFWEKN--CKIIYLCRNAKDVVVSYYYF 142          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1B1_RAT (Sulfotransferase family cytosolic 1B member 1 OS=Rattus norvegicus GN=Sult1b1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLYVDNQ--VPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            + FQ++  DI++ T PK+GTTWL  I   ++N        C   ++T+     VP +E  +    +  V  L    SPR+  THLP   LP S  D+   CK++YL RN KD+ VS +HF
Sbjct:   32 EEFQSRPCDIVIPTYPKSGTTWLSEIVDMVLNDGNV--EKCKRDVITSK----VPMLEQNVPGARRSGVELLKKTPSPRIIKTHLPIDLLPKSFWDNK--CKMIYLARNGKDVAVSYYHF 143          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1B1_BOVIN (Sulfotransferase family cytosolic 1B member 1 OS=Bos taurus GN=SULT1B1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKL--YVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            + FQ++  DI++VT PK+GTTW+  I   +++        C   ++T      VP +EL L     + +  L    SPR+  THLP   +P S  +++  CK++YL RN KD+ VS +HF
Sbjct:   32 EQFQSRPDDIMIVTYPKSGTTWISEIVDMVLHDGDV--EKCKRDVITAK----VPMLELALPGLRTSGLEQLEKNPSPRVVKTHLPIDLIPKSFWENN--CKIIYLARNAKDVAVSFYHF 143          
The following BLAST results are available for this feature:
BLAST of FC923103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ST3A1_RABIT4.202e-1332.35Amine sulfotransferase OS=Oryctolagus cuniculus GN... [more]
ST3A1_MOUSE3.557e-1230.65Amine sulfotransferase OS=Mus musculus GN=Sult3a1 ... [more]
ST1E1_MOUSE6.068e-1232.14Estrogen sulfotransferase, testis isoform OS=Mus m... [more]
ST1E1_BOVIN6.068e-1233.10Estrogen sulfotransferase OS=Bos taurus GN=SULT1E1... [more]
ST1C3_HUMAN7.924e-1239.17Sulfotransferase 1C3 OS=Homo sapiens GN=SULT1C3 PE... [more]
ST1B1_MOUSE7.924e-1236.67Sulfotransferase family cytosolic 1B member 1 OS=M... [more]
ST1E6_RAT1.352e-1135.90Estrogen sulfotransferase, isoform 6 OS=Rattus nor... [more]
ST1E2_RAT1.352e-1135.90Estrogen sulfotransferase, isoform 2 OS=Rattus nor... [more]
ST1B1_RAT1.352e-1136.67Sulfotransferase family cytosolic 1B member 1 OS=R... [more]
ST1B1_BOVIN1.765e-1135.00Sulfotransferase family cytosolic 1B member 1 OS=B... [more]

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Properties
Property NameValue
Genbank descriptionC31701B04EF StrClemenN Citrus clementina cDNA clone C31701B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923103 ID=FC923103; Name=FC923103; organism=Citrus clementina; type=EST; length=717bp
GGATCAAATTCAGCACAAGTAACTCCCCTGCTCAGCGCACAACCAAGACC
CCAAGTTCTCAGGTATATTCAGGCTTCGCCAATCATGCCCACTTCTGTGC
CAACTCAACCTTCAGCTGTTTCCCTTCCTAAATACTTGCAAGAAGACGAA
CTTACACAAGAATGCAGGGAGTTGATCTCCTCCCTTCCCGCAGAAACGGG
TTGGGTTGTCGATCATCTCTATCAATACCAAGGCTTTTGGCACACAAGCA
GGGAGTTACAAGGTGTTCTTGCTTGTCAAAAACATTTCCAAGCTCAGGAT
TCTGATATTCTCCTTGTCACCACTCCAAAAGCAGGCACCACTTGGCTGAA
GGCCATAACGTTTGCCATAGTCAACCGTTTGCGTTATGTTGATAATCCCT
GTAACCACCCTTTGCTTACCAACAATCCTCATGAGCTTGTACCCTTCATT
GAGCTTAAATTATATGTTGATAATCAGGTTCCTGACCTCACCACCTTGAC
CTCTCCAAGGCTCTTTGCAACCCACTTGCCCTTTGTCTCATTGCCTGCAT
CTGTTAAAGATTCATCATCAGCTTGCAAACTTGTGTATTTGTGTAGGAAC
CCTAAGGACATTTTTGTGTCGCTCTGGCACTTTACCACAAGCTGAGACCC
GAAGAAAGGGTACAATTCTCTTGAAGAACTTTTGATAGGTTTTGCAGGGG
AGTGAGTTTGTATGGGC
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