FC923105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_GLOVI (NAD(P)H-quinone oxidoreductase subunit N OS=Gloeobacter violaceus GN=ndhN PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19 Identity = 53/138 (38.41%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 252 RWLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPXQE 665 R+++DVEKH +IA++ P E ++A+GLGD L + + V PAH+GK+ + PPE+ + LP SAKG V+WIIE KVLS EL+ L LP PK++VI E G+ W P ++ Sbjct: 13 RFVADVEKHSSIALWAPPEGGIEGNYQRRLRGIGYRTQIITAKGLGDISRFLLESHGVRPAHLGKKDKRVFTLPPELAIYMDTLPASAKGFVLWIIEGKVLSLFELESLVGLPAAVPKLKVIVEVGSDYNIRWMPLEQ 150
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_MICAN (NAD(P)H-quinone oxidoreductase subunit N OS=Microcystis aeruginosa (strain NIES-843) GN=ndhN PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.861e-19 Identity = 50/141 (35.46%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 255 WLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 ++ D+E++ A+ +Y P E ++ARGLGD LT ++ V P H+GK+ I R ++ PP Y+L LPP +KGLV+WIIE+ VLS E Q+L L P+++ + E G R F W+P Sbjct: 10 FIRDLEQYGALGVYAPLEGGYEGRYQRRLRATGYNVLHITARGLGDLSAYLTGIHGVRPPHLGKKNIGREAAVGPVYFIPPIATYQLENLPPKSKGLVIWIIESFVLSSEEKQYLINLSQQEPRLKFVLELGGERYFRWQP 150
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNP6 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhN PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.799e-18 Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 3 Query: 252 RWLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARW-------YFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 ++L +E+ A+A+Y P E SARGLGDP L ++ V P H+GKQ I Y P V Y L LP +AKGLV+W++E VLS EL + LP P+++V+ E G R F W+P Sbjct: 9 KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRPPHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLPQAEPRLKVVIEMGGDRGFSWQP 150
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNP2 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhN PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.799e-18 Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 255 WLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIA--------RWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPXQEI 668 ++ VEK A+A+Y P E +L+ARGLGD LT+ + + P H+GK+ IA R+Y P Y+L LP +KG+++WIIE VLS+ E ++L L P+++V+ E G R+F +KP ++ Sbjct: 10 FIRTVEKSGAVAVYAPLEGGFEGRYVRRLRCSGYSVVNLTARGLGDVAAYLTQYHGIRPPHLGKKDIAGSGAAVGLRYYVPGIASYQLENLPQKSKGIILWIIEGFVLSRQEQEYLVSLTQDNPQIKVVVEMGGDRQFSFKPLADL 155
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNE7 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC 7942) GN=ndhN PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.799e-18 Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 3 Query: 252 RWLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARW-------YFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 ++L +E+ A+A+Y P E SARGLGDP L ++ V P H+GKQ I Y P V Y L LP +AKGLV+W++E VLS EL + LP P+++V+ E G R F W+P Sbjct: 9 KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRPPHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLPQAEPRLKVVIEMGGDRGFSWQP 150
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNY3 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechocystis sp. (strain PCC 6803) GN=ndhN PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.105e-17 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 267 VEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 +E A+A+Y P E LSARGLGD E L +V+ V PAH+GK+ IA+ ++ P Y+L LP +KGLV+WI+E +LS++E+Q L L PK++V+ E G R F W+P Sbjct: 17 LENDGALAVYAPLEGGYEGRYQRRLRANGYASISLSARGLGDVEAYLMQVHGVRPAHLGKKNIAQEGAVGPIYFAQPIAGYQLENLPAQSKGLVLWILEGYILSQTEIQDLISLTKRVPKLKVVLEMGGDRVFRWQP 153
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNJB (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. GN=ndhN PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 44/137 (32.12%), Postives = 67/137 (48.91%), Query Frame = 3 Query: 252 RWLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPXQ 662 +++ +E+ A+AIY E LS++G+GD + LT+++ V PA +GK ++FP ++ A LPP AKGLV W E V S+ EL +L L V+ + E G R W+P Q Sbjct: 9 KFVQQLEQAGALAIYVTPEGGSEGHYLRRLRGAGYEVVTLSSKGIGDLASYLTRIHGVRPATLGKSERRTYFFPALIEQYRATLPPKAKGLVFWFYEGHVFSQQELSYLVKLSREDKGVKFVVELGRERSIRWQPLQ 145
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNJA (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndhN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13 Identity = 43/137 (31.39%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 252 RWLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPXQ 662 +++ +E+ A+AI+ E LS++G+GD + LT + V PA +GK +++P ++ A LPP AKGLV W E VLS+ EL +L L V+ + E G R W+P Q Sbjct: 9 KFVQQLEQCGALAIFVTPEGGSEGHYLRRLRGAGYEVVTLSSKGIGDLASYLTSSHGVRPATLGKSQRRTYFYPSLIEQYRATLPPKAKGLVFWFYEGHVLSRQELSYLVKLSQEDKGVKFVVELGRERSIRWQPLQ 145
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNPX (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain WH8102) GN=ndhN PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 44/134 (32.84%), Postives = 66/134 (49.25%), Query Frame = 3 Query: 264 DVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKG---LVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 D+E H +A++ P E SARGLGDPE LT+ + + P H+G Q + R EV + L G + +W++E +VLS+SEL+ L L + P++R+I E G R W+P Sbjct: 13 DLEAHGCLAVHAPLEGGAETRLLRRLRGAGYRTRLWSARGLGDPEVFLTQKHGIRPPHLGHQSVGRGAAVGEVQEVVPQLGDLLDGDAQVALWLLEGQVLSQSELRSLCDLCSREPRLRIIVEMGGARSLRWQP 146
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_PROM5 (NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus (strain MIT 9515) GN=ndhN PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 3 Query: 261 SDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPP----SAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWK 653 +D++K+K +A++ P E SARGLGDPE L ++ + P H+G Q I R EV + + K ++W++E +VLS+SEL+ L LPT K++++ E G RK WK Sbjct: 12 NDLKKNKCLAMFAPLEGGYETRLLRRMRAKGFKTYITSARGLGDPEVFLLNLHGIRPPHLGHQSIGRNGALGEVQQVIPQASELFNENDKDKLLWLLEGQVLSQSELENLIKLPTADNKLKIVVEMGGSRKLEWK 146 The following BLAST results are available for this feature:
BLAST of FC923105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923105 ID=FC923105; Name=FC923105; organism=Citrus clementina; type=EST; length=669bpback to top |