FC923108

Overview
NameFC923108
Unique NameFC923108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length636
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.763e-46
Identity = 94/209 (44.98%), Postives = 140/209 (66.99%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQG-HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK----GSLPLP---WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLXD 634
            G  VA+K L+    +    ++ ++++ +  L H + V+L+GYC+E + R+L+Y+F  +GSL + L  +    G+ P P   W+ R+KIA GAAKGL FLHE+ + P+++RD ++SN+LL  D+ AK++DF L   + +      STRV+GT+GY APEY MTG +T KSDVYSFGVVLLE+LTGR+ +D   P G+ +LV WA P L +
Sbjct:   94 GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSE 302          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.303e-46
Identity = 95/191 (49.74%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   23 PGTGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDG----KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNR 583
            PG GL VAVK    G LQG KE+  E+  L  L H NLV L+GYC +  +++LVYE+MP GSL++ L  +   PL  ++R++IALG+A+G+ +LH EA+ P+I+RD K SNILLD+  N K++DFG++K    DG    + HV+T V GT GY  PEY ++  LT KSDVYS G+V LE+LTG R +   R
Sbjct:  651 PG-GLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGR 840          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.750e-46
Identity = 91/192 (47.40%), Postives = 129/192 (67.19%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 616
            VAVK  + G  QG  E+L+E+  L  + H +LV LVGYC E  + +LVYE+M +G L++HL+   + PL W  R+++ +GAA+GL +LH  + + +I+RD K++NILLD +Y AK++DFGL++  P   +THVST V G++GY  PEY     LT KSDVYSFGVVL E+L  R ++D      + NL EWA
Sbjct:  514 VAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWA 705          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.143e-45
Identity = 99/192 (51.56%), Postives = 126/192 (65.62%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 613
            VAVK L+H   QG+KE+ AEV  L  + H NLV LVGYC + D   L+YE+M  G L EN   ++G   L W  RM+IA+ AA+GL +LH     P+++RD KT+NILL+  Y AKL+DFGL++  P DG++HVST V GT GY  PEY  T  L+ KSDVYSFGVVLLE++T +   DK R     N  EW
Sbjct:  590 VAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTHIN--EW 779          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.492e-45
Identity = 97/202 (48.02%), Postives = 132/202 (65.35%), Query Frame = 2
Query:   26 GTGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL---PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED-GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 619
            G    VAVK L     QG KE+  E+  L  L H +LV L+GYC ED++ +LVYE+MP G+L++HLFR+      PL W  R++I +GAA+GL +LH  A+  +I+RD KT+NILLD ++  K+SDFGL++  P    +THVST V GT+GY  PEY     LT KSDVYSFGVVLLE+L  R    ++ P  + +L+ W +
Sbjct:  539 GGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVK 740          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.492e-45
Identity = 97/202 (48.02%), Postives = 133/202 (65.84%), Query Frame = 2
Query:   26 GTGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL---PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED-GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 619
            G    VAVK L     QG KE+  E+  L  L H +LV L+GYC +D++ +LVYE+MP G+L++HLFR+      PL W  R++I +GAA+GL +LH  A+  +I+RD KT+NILLD ++ AK+SDFGL++  P    +THVST V GT+GY  PEY     LT KSDVYSFGVVLLE+L  R    ++ P  + +L+ W +
Sbjct:  546 GGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVK 747          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.949e-45
Identity = 92/183 (50.27%), Postives = 125/183 (68.31%), Query Frame = 2
Query:   26 GTGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED-----GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 559
            G+G  VA+K    G LQG KE+L E+  L  L H NLV L+G+C E+ +++LVYE+M  G+L +++  K   PL +++R++IALG+AKG+ +LH EA  P+ +RD K SNILLD+ + AK++DFGL++ AP          HVST V GT GY  PEY +T  LT KSDVYS GVVLLE+ TG
Sbjct:  645 GSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTG 827          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.546e-45
Identity = 93/195 (47.69%), Postives = 125/195 (64.10%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 616
            G  VAVK  N    QG  E+  E+  L  L H +LV L+GYC E  + +LVYE+M  G L +HL+     PL W  R++I +GAA+GL +LH  A + +I+RD KT+NILLD +  AK++DFGL+K  P   +THVST V G++GY  PEY     LT KSDVYSFGVVL+E+L  R +++   P  + N+ EWA
Sbjct:  532 GTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWA 726          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.546e-45
Identity = 94/205 (45.85%), Postives = 137/205 (66.83%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKE--WLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG--SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLXD 634
            G  +A+K +++  L   +E  +L  V+ +  L HPN+V L GYC E  QRLLVYE++  G+L++ L      S+ L W+ R+K+ALG AK L +LHE     +++R+FK++NILLD + N  LSD GLA   P   +  VST+V+G++GY+APE+ ++G  T KSDVY+FGVV+LE+LTGR+ +D +R   E +LV WA P L D
Sbjct:  417 GKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTER-QVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHD 620          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.325e-45
Identity = 93/178 (52.25%), Postives = 122/178 (68.54%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 559
            G  VAVK L+    QG++E+L E+  +  L HPNLVKL G+C+E  Q LL YE+M   SL + LF  +   +P+ W  R KI  G AKGLAFLHEE+    ++RD K +NILLD D   K+SDFGLA+   E+ KTH+ST+V GT GY APEY + G+LT K+DVYSFGV++LE++ G
Sbjct:  703 GRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLAR-LDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879          
The following BLAST results are available for this feature:
BLAST of FC923108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2197_ARATH1.763e-4644.98Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
Y5374_ARATH2.303e-4649.74Probable LRR receptor-like serine/threonine-protei... [more]
Y5241_ARATH8.750e-4647.40Probable receptor-like protein kinase At5g24010 OS... [more]
Y5188_ARATH1.143e-4551.56Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH1.492e-4548.02Putative receptor-like protein kinase At5g39000 OS... [more]
Y5389_ARATH1.492e-4548.02Probable receptor-like protein kinase At5g38990 OS... [more]
Y1684_ARATH1.949e-4550.27Probable LRR receptor-like serine/threonine-protei... [more]
THE1_ARATH2.546e-4547.69Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
SRF8_ARATH2.546e-4545.85Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
RKF1_ARATH3.325e-4552.25Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31701B09EF StrClemenN Citrus clementina cDNA clone C31701B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923108 ID=FC923108; Name=FC923108; organism=Citrus clementina; type=EST; length=636bp
GAATGGAACTGCTCCAGTGAAACCCGGTACTGGGCTTACTGTTGCAGTTA
AAACCTTAAATCATGGTGGACTTCAGGGACATAAAGAGTGGCTGGCGGAA
GTTAATTTCCTTGGCAACCTCCTCCATCCCAATTTGGTTAAATTGGTTGG
ATACTGCATCGAAGATGATCAAAGGCTGCTGGTATATGAGTTTATGCCTC
GAGGGAGTTTGGAAAACCACCTCTTCAGAAAAGGGTCCTTGCCACTTCCA
TGGTCTATCAGAATGAAGATTGCACTTGGTGCTGCTAAGGGTCTTGCCTT
TCTTCATGAAGAAGCTGAAAAACCTGTGATATATCGTGATTTCAAAACAT
CAAATATTTTATTAGATGCGGATTACAATGCCAAACTCTCTGATTTTGGA
CTTGCCAAAGACGCCCCAGAGGATGGTAAAACACATGTATCTACTCGAGT
AATGGGAACGTATGGATATGCTGCTCCAGAGTATGTGATGACTGGACATT
TGACATCAAAGAGTGATGTCTATAGCTTTGGAGTAGTTTTACTTGAAATG
TTGACTGGACGAAGATCCATGGATAAAAACCGACCAAATGGGGAACACAA
CCTTGTGGAATGGGCAAGACCGCATCTTGNGGACAA
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