FC923108

Overview
NameFC923108
Unique NameFC923108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length636
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: TXK_MOUSE (Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 56/186 (30.11%), Postives = 95/186 (51.08%), Query Frame = 2
Query:   35 LTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 589
            + VA+K +N G +   ++++ E   +  L H  LV+L G CI+     +V EFM  G L ++L  RKG L    ++ + +     +G+A+L        I+RD    N L+ +    K+SDFG+A+   +D +   S+       +  PE       +SKSDV+SFGV++ E+ T  +   +N+ N
Sbjct:  294 IPVAIKAINEGSMS-EEDFIEEAKVMMKLSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQK--ALLLSMCQDICEGMAYLERSC---YIHRDLAARNCLVSSACVVKISDFGMARYVLDD-EYISSSGAKFPVKWCPPEVFHFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSN 472          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: STE11_YEAST (Serine/threonine-protein kinase STE11 OS=Saccharomyces cerevisiae GN=STE11 PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 51/156 (32.69%), Postives = 84/156 (53.85%), Query Frame = 2
Query:   98 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD-APEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 562
            E+N L  L H N+V   G   E     +  E++P GS+ + L   G  P   S+          G+A+LH+   K +I+RD K +NIL+D     K++DFG++K  +P + K +    + G+  + +PE V     T+K+D++S G V++EM TG+
Sbjct:  504 EMNLLKELHHENIVTYYGASQEGGNLNIFLEYVPGGSVSSMLNNYG--PFEESLITNFTRQILIGVAYLHK---KNIIHRDIKGANILIDIKGCVKITDFGISKKLSPLNKKQNKRASLQGSVFWMSPEVVKQTATTAKADIWSTGCVVIEMFTGK 654          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: STE11_YEAS7 (Serine/threonine-protein kinase STE11 OS=Saccharomyces cerevisiae (strain YJM789) GN=STE11 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 51/156 (32.69%), Postives = 84/156 (53.85%), Query Frame = 2
Query:   98 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD-APEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 562
            E+N L  L H N+V   G   E     +  E++P GS+ + L   G  P   S+          G+A+LH+   K +I+RD K +NIL+D     K++DFG++K  +P + K +    + G+  + +PE V     T+K+D++S G V++EM TG+
Sbjct:  504 EMNLLKELHHENIVTYYGASQEGGNLNIFLEYVPGGSVSSMLNNYG--PFEESLITNFTRQILIGVAYLHK---KNIIHRDIKGANILIDIKGCVKITDFGISKKLSPLNKKQNKRASLQGSVFWMSPEVVKQTATTAKADIWSTGCVVIEMFTGK 654          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: PKN2_MYXXA (Serine/threonine-protein kinase pkn2 OS=Myxococcus xanthus GN=pkn2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 62/193 (32.12%), Postives = 96/193 (49.74%), Query Frame = 2
Query:   32 GLTVAVKTLNHG--GLQGHKE-WLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTR--VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 586
            G  VA+K L+H      G  E +  E   L  + HP +V++V +    D   LV EF+   SL + L      P+P    + +    A+GLA +H+   K +I+RD K  N+ +        A+L DFG+A+    D  + VS    V+GT  Y +PE  +   + ++SD+YSFGV+   +L+GR   D   P
Sbjct:   36 GRKVAIKVLHHDLHAQAGMAERFKREARLLSAVEHPAVVRIVDFGESGDHACLVMEFVEGESLYDVLTPG---PMPPGRALPLLQQLAEGLAAIHD---KGIIHRDLKPENVFISKSARGEQARLLDFGIARLVEPDAASSVSQIGVVLGTPEYLSPEQAVGAKVDTRSDLYSFGVLTYRVLSGRLPFDGPLP 222          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: MKH1_SCHPO (MAP kinase kinase kinase mkh1 OS=Schizosaccharomyces pombe GN=mkh1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 50/159 (31.45%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   95 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGH--LTSKSDVYSFGVVLLEMLTGRR 565
            AE++ + +L H N+V+ +G+   +    +  E++  GS+   L   G  P    +   ++     GL++LH    K +I+RD K  N+L+D D   K+SDFG++K +        +  + G+  + APE +   H   ++K DV+S G V+LEML GRR
Sbjct:  879 AEISMIADLDHLNIVQYLGFEKTETDISIFLEYVSGGSIGRCLRNYG--PFEEQLVRFVSRQVLYGLSYLHS---KGIIHRDLKADNLLIDFDGVCKISDFGISKHSDNVYDNDANLSMQGSIFWMAPEVIHNDHQGYSAKVDVWSLGCVVLEMLAGRR 1032          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: LIMK1_MOUSE (LIM domain kinase 1 OS=Mus musculus GN=Limk1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 56/194 (28.87%), Postives = 94/194 (48.45%), Query Frame = 2
Query:   29 TGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR------------VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD 574
            TG  + +K L     +  + +L EV  +  L HPN++K +G   +D +   + E++  G+L   + +      PWS R+  A   A G+A+LH      +I+RD  + N L+  + N  ++DFGLA+   ++       R            V+G   + APE +       K DV+SFG+VL E++ GR + D
Sbjct:  361 TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKNMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENRNVVVADFGLARLMIDEKNQSEDLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 549          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: FER_CANFA (Proto-oncogene tyrosine-protein kinase Fer OS=Canis familiaris GN=FER PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHK-EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG-TYGYAAPEYVMTGHLTSKSDVYSFGVVLLE 547
            VAVKT      Q  K ++L E   L    HPN+VKL+G C +     ++ E +P G   + L RK    +     +K +L AA G+++L     K  I+RD    N L+  +   K+SDFG+++   EDG  + S+ +      + APE +  G  +S+SDV+SFG++L E
Sbjct:  588 VAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPIYIIMELVPGGDFLSFL-RKKKDEIKLKQLVKFSLDAASGMSYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQ--EDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWE 752          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: EPHB3_XENLA (Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb3 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 53/176 (30.11%), Postives = 91/176 (51.70%), Query Frame = 2
Query:   41 VAVKTLNHGGL-QGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG---TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 556
            VA+KTL  G   Q  +++L E + +G   HPN+++L G        +++ EFM  G+L++ L R           + I  G A G+ +L   +E   ++RD    NIL++++   K+SDFGL++           T  +G      + APE +     TS SDV+S+G+V+ E+++
Sbjct:  638 VAIKTLKAGYTEQQRRDFLGEASIMGQFDHPNIIRLEGVVTRSRPVMILTEFMENGALDSFL-RMNDGQFTVIQLVGILRGIASGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLENSRSDPTYTSALGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMS 809          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: EPHA5_MOUSE (Ephrin type-A receptor 5 OS=Mus musculus GN=Epha5 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 53/176 (30.11%), Postives = 95/176 (53.98%), Query Frame = 2
Query:   35 LTVAVKTLNHGGLQGHK-EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 556
            L VA+KTL  G  +  + ++L E + +G   HPN++ L G   +    ++V E+M  GSL+  L +K          + +  G A G+ +L   ++   ++RD    NIL++++   K+SDFGL++   +D +   +TR       + APE +     TS SDV+S+G+V+ E+++
Sbjct:  541 LPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGIAAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 712          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: EPHA2_HUMAN (Ephrin type-A receptor 2 OS=Homo sapiens GN=EPHA2 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 52/176 (29.55%), Postives = 95/176 (53.98%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHK-EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL--GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 556
            VA+KTL  G  +  + ++L E   +G   H N+++L G   +    +++ E+M  G+L+  L  K      +S+   + +  G A G+ +L   A    ++RD    NIL++++   K+SDFGL++   +D + T+ ++       + APE +     TS SDV+SFG+V+ E++T
Sbjct:  643 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 812          
The following BLAST results are available for this feature:
BLAST of FC923108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TXK_MOUSE1.362e-1430.11Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk... [more]
STE11_YEAST1.362e-1432.69Serine/threonine-protein kinase STE11 OS=Saccharom... [more]
STE11_YEAS71.362e-1432.69Serine/threonine-protein kinase STE11 OS=Saccharom... [more]
PKN2_MYXXA1.362e-1432.12Serine/threonine-protein kinase pkn2 OS=Myxococcus... [more]
MKH1_SCHPO1.362e-1431.45MAP kinase kinase kinase mkh1 OS=Schizosaccharomyc... [more]
LIMK1_MOUSE1.362e-1428.87LIM domain kinase 1 OS=Mus musculus GN=Limk1 PE=1 ... [more]
FER_CANFA1.362e-1433.92Proto-oncogene tyrosine-protein kinase Fer OS=Cani... [more]
EPHB3_XENLA1.362e-1430.11Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb... [more]
EPHA5_MOUSE1.362e-1430.11Ephrin type-A receptor 5 OS=Mus musculus GN=Epha5 ... [more]
EPHA2_HUMAN1.362e-1429.55Ephrin type-A receptor 2 OS=Homo sapiens GN=EPHA2 ... [more]

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Properties
Property NameValue
Genbank descriptionC31701B09EF StrClemenN Citrus clementina cDNA clone C31701B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923108 ID=FC923108; Name=FC923108; organism=Citrus clementina; type=EST; length=636bp
GAATGGAACTGCTCCAGTGAAACCCGGTACTGGGCTTACTGTTGCAGTTA
AAACCTTAAATCATGGTGGACTTCAGGGACATAAAGAGTGGCTGGCGGAA
GTTAATTTCCTTGGCAACCTCCTCCATCCCAATTTGGTTAAATTGGTTGG
ATACTGCATCGAAGATGATCAAAGGCTGCTGGTATATGAGTTTATGCCTC
GAGGGAGTTTGGAAAACCACCTCTTCAGAAAAGGGTCCTTGCCACTTCCA
TGGTCTATCAGAATGAAGATTGCACTTGGTGCTGCTAAGGGTCTTGCCTT
TCTTCATGAAGAAGCTGAAAAACCTGTGATATATCGTGATTTCAAAACAT
CAAATATTTTATTAGATGCGGATTACAATGCCAAACTCTCTGATTTTGGA
CTTGCCAAAGACGCCCCAGAGGATGGTAAAACACATGTATCTACTCGAGT
AATGGGAACGTATGGATATGCTGCTCCAGAGTATGTGATGACTGGACATT
TGACATCAAAGAGTGATGTCTATAGCTTTGGAGTAGTTTTACTTGAAATG
TTGACTGGACGAAGATCCATGGATAAAAACCGACCAAATGGGGAACACAA
CCTTGTGGAATGGGCAAGACCGCATCTTGNGGACAA
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