FC923108

Overview
NameFC923108
Unique NameFC923108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length636
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.307e-41
Identity = 94/202 (46.53%), Postives = 131/202 (64.85%), Query Frame = 2
Query:   32 GLTVAVKT--LNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL---PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 622
            G TVAVK   ++    +   E+  E++ L  L H +L+ L+GYC E  +RLLVYEFM  GSL NHL  K       L W  R+ IA+ AA+G+ +LH  A  PVI+RD K+SNIL+D ++NA+++DFGL+   P D  + ++    GT GY  PEY    +LT+KSDVYSFGV+LLE+L+GR+++D +   G  N+VEWA P
Sbjct:  534 GTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEG--NIVEWAVP 733          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.708e-41
Identity = 90/193 (46.63%), Postives = 121/193 (62.69%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 619
            VAVK L+    QG+KE+  EV  L  + H NLV LVGYC E D   L+Y++M  G L+ H    GS  + W  R+ IA+ AA GL +LH   +  +++RD K+SNILLD    AKL+DFGL++  P   ++HVST V GT+GY   EY  T  L+ KSDVYSFGVVLLE++T +  +D NR     ++ EW +
Sbjct:  595 VAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHF--SGSSIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNR--DMPHIAEWVK 783          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.913e-41
Identity = 87/180 (48.33%), Postives = 120/180 (66.67%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-GSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRS 568
            GL +AVK L+    QG+ E+  EV  +  L H NLVKL G+ I++ +RLLVYEF+P  SL+  LF       L W  R  I +G ++GL +LHE +E P+I+RD K+SN+LLD     K+SDFG+A+    D    V+ RV+GTYGY APEY M G  + K+DVYSFGV++LE++TG+R+
Sbjct:  355 GLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRN 534          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.804e-41
Identity = 83/193 (43.01%), Postives = 130/193 (67.36%), Query Frame = 2
Query:   44 AVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH--NLVEWA 616
            AVK L+ G  QG +++ AE++ L  + HPNLV L+GY   + +  L+Y ++  G+L++ +  +    + W +  KIAL  A+ L++LHE+    V++RD K SNILLD +YNA LSDFGL+K      ++HV+T V GT+GY APEY MT  ++ K+DVYS+G+VLLE+++ +R++D +  + E+  N+V WA
Sbjct:  287 AVKRLSVGRFQGDQQFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSK-LLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWA 478          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.804e-41
Identity = 96/202 (47.52%), Postives = 128/202 (63.37%), Query Frame = 2
Query:   32 GLTVAVKTLNHGG--LQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG---SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 622
            G  VAVK         +  KE+  E++ L  L H +L+ L+GYC +  +RLLVYEFM  GSL  HL  K       L W+ R+ IA+ AA+G+ +LH  A  PVI+RD K+SNIL+D D+NA+++DFGL+   P D  T +S    GT GY  PEY    +LT+KSDVYSFGVVLLE+L+GR+++D     G  N+VEWA P
Sbjct:  527 GTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEG--NIVEWAVP 726          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.968e-41
Identity = 88/195 (45.13%), Postives = 126/195 (64.62%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE-AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 613
            G   A+K    G  QG  E+  E+  L  + H +LV L GYC E+ + +LVYEFM +G+L+ HL+      L W  R++I +GAA+GL +LH   +E  +I+RD K++NILLD    AK++DFGL+K   +D ++++S  + GT+GY  PEY+ T  LT KSDVY+FGVVLLE+L  R ++D   P+ E NL EW
Sbjct:  510 GTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQD-ESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEW 703          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.968e-41
Identity = 92/201 (45.77%), Postives = 126/201 (62.69%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEV-----NFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 619
            G  VAVK L   G +  KE+ AE+     N  G+  HPNLV+L G+C++  +++LV+E+M  GSLE  +  K  L   W  R+ IA   A+GL FLH E    +++RD K SN+LLD   NA+++DFGLA+     G +HVST + GT GY APEY  T   T++ DVYS+GV+ +E+ TGRR++D     GE  LVEWAR
Sbjct:  836 GREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTKLQ--WKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLAR-LLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVD----GGEECLVEWAR 1029          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.489e-41
Identity = 92/205 (44.88%), Postives = 130/205 (63.41%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHK--EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP--LPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLXD 634
            G   AVK L+    +  +  E++  VN +  + H N+V+LVGYC E DQRLLVYE+   G+L++ L         L W+ R+ +ALGAA+ L +LHE  E P+I+R+FK++N+LLD D +  +SD GLA        + +S +++  YGY APE+  +G  T +SDVYSFGVV+LE+LTGR S D++R  GE  LV WA P L D
Sbjct:  507 GKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEF-DSGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHD 710          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.489e-41
Identity = 86/181 (47.51%), Postives = 123/181 (67.96%), Query Frame = 2
Query:   29 TGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRS 568
            +G  +AVK L  G  QG  E+  EV  L  L H NLVKL+G+C E ++ +LVYE +P  SL++ +F +     L W +R +I  G A+GL +LHE+++  +I+RD K SNILLDA+ N K++DFG+A+    D     ++RV+GTYGY APEYV  G  ++KSDVYSFGV+LLEM++G ++
Sbjct:  361 SGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKN 541          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 8.475e-41
Identity = 93/203 (45.81%), Postives = 128/203 (63.05%), Query Frame = 2
Query:   32 GLTVAVKTL------NHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTH-VSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 619
            G  VAVK L      N  G      + AE+  LGN+ H N+VKL+GYC     +LL+Y + P G+L+  L  +G+  L W  R KIA+GAA+GLA+LH +    +++RD K +NILLD+ Y A L+DFGLAK        H   +RV G+YGY APEY  T ++T KSDVYS+GVVLLE+L+GR +++    +G H +VEW +
Sbjct:  794 GDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLL--QGNRNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGDGLH-IVEWVK 993          
The following BLAST results are available for this feature:
BLAST of FC923108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ACR4_ARATH1.307e-4146.53Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y1756_ARATH1.708e-4146.63Probable LRR receptor-like serine/threonine-protei... [more]
CRK27_ARATH2.913e-4148.33Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
RPK1_ARATH3.804e-4143.01Probable LRR receptor-like serine/threonine-protei... [more]
CRI4_MAIZE3.804e-4147.52Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y2232_ARATH4.968e-4145.13Probable receptor-like protein kinase At2g23200 OS... [more]
Y1743_ARATH4.968e-4145.77Probable LRR receptor-like serine/threonine-protei... [more]
SRF3_ARATH6.489e-4144.88Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
CRK36_ARATH6.489e-4147.51Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y1341_ARATH8.475e-4145.81Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31701B09EF StrClemenN Citrus clementina cDNA clone C31701B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923108 ID=FC923108; Name=FC923108; organism=Citrus clementina; type=EST; length=636bp
GAATGGAACTGCTCCAGTGAAACCCGGTACTGGGCTTACTGTTGCAGTTA
AAACCTTAAATCATGGTGGACTTCAGGGACATAAAGAGTGGCTGGCGGAA
GTTAATTTCCTTGGCAACCTCCTCCATCCCAATTTGGTTAAATTGGTTGG
ATACTGCATCGAAGATGATCAAAGGCTGCTGGTATATGAGTTTATGCCTC
GAGGGAGTTTGGAAAACCACCTCTTCAGAAAAGGGTCCTTGCCACTTCCA
TGGTCTATCAGAATGAAGATTGCACTTGGTGCTGCTAAGGGTCTTGCCTT
TCTTCATGAAGAAGCTGAAAAACCTGTGATATATCGTGATTTCAAAACAT
CAAATATTTTATTAGATGCGGATTACAATGCCAAACTCTCTGATTTTGGA
CTTGCCAAAGACGCCCCAGAGGATGGTAAAACACATGTATCTACTCGAGT
AATGGGAACGTATGGATATGCTGCTCCAGAGTATGTGATGACTGGACATT
TGACATCAAAGAGTGATGTCTATAGCTTTGGAGTAGTTTTACTTGAAATG
TTGACTGGACGAAGATCCATGGATAAAAACCGACCAAATGGGGAACACAA
CCTTGTGGAATGGGCAAGACCGCATCTTGNGGACAA
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