FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.371e-33 Identity = 74/195 (37.95%), Postives = 123/195 (63.08%), Query Frame = 3 Query: 72 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 ++ YDR + FSP+G LFQVEYA+EA++ G+ A+G++ K+ +VL VEK+ T+ L + S+ KI+++D+HI +GL AD+R L+ A +E Q++R + + +VE ++ + + R+ + RPFG+S LI G D +G P+LY TDPSG++ A AIG S+ L++ Y D++ +E+ +A Sbjct: 1 MSSARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKLQDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRY---TQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEKNY-TDVSEEESIKLA 191
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.044e-33 Identity = 81/190 (42.63%), Postives = 112/190 (58.95%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHAR-VETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 Y + TFSP G+L Q+EYA+ A+ G TA+G+K G+VLA EK+ +SPL +PSS+ KI I +IG SG+ D R LV+ AR V ++ Y E Q D+A E + RP+GVSLLIAG DE GP LY DPSG+++ A AIG + A + L+++Y + L L++A IA Sbjct: 5 YSFSLTTFSPSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQ---DVARVMQEATQSGGVRPYGVSLLIAGWDEGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIA 191
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.282e-33 Identity = 74/187 (39.57%), Postives = 114/187 (60.96%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 ++Y + TFSP G+L Q+E+A+ A+ G T++G+K GVV+A EK++ S L++ +SV+KI + +IG SG+ D R LV +R + Q + Y E + V TQ + + A E + RPFGVSLLIAG D+NGP LY DPSG+++ A A+G A + L+++Y +D+ L +A Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPV---TQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.282e-33 Identity = 74/187 (39.57%), Postives = 114/187 (60.96%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 ++Y + TFSP G+L Q+E+A+ A+ G T++G+K GVV+A EK++ S L++ +SV+KI + +IG SG+ D R LV +R + Q + Y E + V TQ + + A E + RPFGVSLLIAG D+NGP LY DPSG+++ A A+G A + L+++Y +D+ L +A Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPV---TQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.898e-33 Identity = 72/187 (38.50%), Postives = 114/187 (60.96%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 ++Y + TFSP G+L Q+E+A+ A+ G T++G+K GVV+A EK++ S L++ +SV+KI + +IG SG+ D R LV +R + + + Y EP+ V TQ + + A E + RPFGVSLL+AG D+ GP LY DPSG+++ A A+G A + L+++Y +D+ L +A Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPV---TQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.898e-33 Identity = 72/187 (38.50%), Postives = 114/187 (60.96%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 ++Y + TFSP G+L Q+E+A+ A+ G T++G+K GVV+A EK++ S L++ +SV+KI + +IG SG+ D R LV +R + + + Y EP+ V TQ + + A E + RPFGVSLL+AG D+ GP LY DPSG+++ A A+G A + L+++Y +D+ L +A Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPV---TQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.177e-32 Identity = 75/182 (41.21%), Postives = 111/182 (60.99%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLT 629 YDR + FSP+G LFQVEYA EA++ G A+G+K K+ ++ AVEK+ L + + KI ++DEHI A +GL ADAR +V HA++E Q R SY + + V+ + + + R + S SRP+GVS +I G +ENG P L+ T+PSGT NA AIG + +++ Y+ +T Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQR---STQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMT 181
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.177e-32 Identity = 73/187 (39.04%), Postives = 113/187 (60.43%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 + YDR V FSP+G L QVEYA EA++ GSTA+G++ VVL VEK+ + L E V KI +D H+ A +GL ADAR ++ A+VE Q+HR + +P+T+E T+ + L ++ + + RPFG+S LI G D +G + L+ T+PSG F++ A A G ++ ++ Y+++ E Sbjct: 3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGR---RPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANE 186
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.007e-32 Identity = 77/179 (43.02%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQY 614 YDR ++ FSP+G +FQVEYA+EA+K G+ A+G+K K VVL E+R T L + + K+ +ID H+ + SGL AD+R L+E ARVE Q+HR + +P+TVE T+ + + R+ + RPFGVS LIAG D ++ P LY T+PSG + +A+ IG S+ L++ Y Sbjct: 4 YDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRY---TQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNY 179
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_YEAST (Proteasome component C1 OS=Saccharomyces cerevisiae GN=PRE10 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.007e-32 Identity = 79/194 (40.72%), Postives = 111/194 (57.22%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE----SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ---EQYKQDLTLQEA 641 T YD + FSP+GR FQVEYA++A++ G+T+IG+K +GVV AVEK ITS LL P KI +D HIGC SGLI D R LV R E + + Y P+ + + A R G+ + + RPFGVS + G D+NG LY +PSG++W A G G + A + L+ + + + L+ +EA Sbjct: 6 TGYDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPA-------FADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREA 192 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |