FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.007e-32 Identity = 76/187 (40.64%), Postives = 117/187 (62.57%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 ++Y + TFSP G+L Q+E+A++A G +AIG+K K GVVL EK++ S L++ +SV+KI I E+IG +G+ D+R L++ AR E++ + Y E + V Q + +LA E + RPFGVSLL+AG DE GP LY DPSG+++ A AIG + + L+++Y DL +++A Sbjct: 3 SDYSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHS-LVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPV---LQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKGPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDA 185
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.621e-32 Identity = 76/191 (39.79%), Postives = 116/191 (60.73%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE-PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YD FSPEGRL+QVEYA+E+I TAIG+ +G+VLA E+++TS LLE +S EK+ ++++ I A++GL ADA L+ AR+ QN+ +Y E + VE + L D+ + + RPFGVS + AG D+ G LY ++PSG + A ++G+ + A + LQ YK D+ + +A +A Sbjct: 6 YDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGY---TQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELA 193
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.471e-32 Identity = 79/191 (41.36%), Postives = 114/191 (59.69%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YD FSPEGRL+QVEYA+EAI T +G+ + EG+V+A E++ LL+ S EK+ + ++I C ++G+ ADA L+ H R ++R SYGE M VE Q LC+ R+ + RPFGVSLL G D++ G LY +DPSG + A IGS + A + L+++YK L+EA+ +A Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRY---TQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSP-NLEEAKQLA 191
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.471e-32 Identity = 78/187 (41.71%), Postives = 110/187 (58.82%), Query Frame = 3 Query: 84 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHAR-VETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 +Y + TFSP G+L Q+EYA+ A+ G T++G+K +GVVLA EK+ TS L +S+EK+ I IG SG+ D R LV+ +R V ++ Y E + Q ++A E + RPFGVSLL+AG DE GPSLY DPSGT++ A AIG S A + L+++Y +L L +A Sbjct: 4 KYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQ---EIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1_ORYSJ (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica GN=PAF1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.840e-32 Identity = 76/180 (42.22%), Postives = 104/180 (57.78%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYK 617 R +YD V T+SP GRLFQVEYA+EA+K GS +GL+++ VLA + S L S K+ + +H G A++GL AD R L R E NH F Y P+ V L D A + S RP+GV LL+AG DE+G LYY PSG +++ A AIGS S+ A + L+ +++ Sbjct: 3 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKA---QVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFE 177
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1_DROME (Proteasome subunit alpha type-1 OS=Drosophila melanogaster GN=Pros35 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.840e-32 Identity = 76/191 (39.79%), Postives = 112/191 (58.64%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETI 650 R +YD V +SP+GRL QVEYA+EA+KLG+ +GLK K+ VL + TS L + KI+ ID+H+G +++GL ADAR L + R E N++ SY T ++ + +L + + RP+GV LL+AG DE GP +Y PS TF+ C A +IGS S+ A + L++ + L + E I Sbjct: 3 RNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQ--RKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYD---TTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEII 188
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31 Identity = 75/182 (41.21%), Postives = 114/182 (62.64%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQD 623 + YDR V FSP+GRL QVEYA EA++ GSTA+G++ VVL VEK+ + L E +V KI +D H+ A +GL DAR L+ A+VE Q+HR + +P+T+E T+ + L ++ + + RPFG+S LI G D +G P L+ T+PSG F++ A A G ++ ++QY+++ Sbjct: 3 SRYDRAVTIFSPDGRLLQVEYAQEAVRKGSTAVGVRGGNCVVLGVEKKSVAKLQEDRTVRKICVLD-HVVMAFAGL-TDARILINRAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGR---RPFGISCLIGGFDADGSPYLFQTEPSGIFYEYKANATGCSAKTVREFFEKQYREE 179
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 8.432e-31 Identity = 76/185 (41.08%), Postives = 107/185 (57.84%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 Y + TFSP G+L Q+EYA+ A+ G+ ++G+K GVVLA EK+ S L + SV KI I +HIG SG+ D R LV AR Q + Y EP+ T Q + +A E + RPFGVSLLIAG DE+ P L+ +DPSG ++ A A+G + L+++Y +DL L++A Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPI---PTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLELEDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1_DICDI (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum GN=psmA1 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.438e-30 Identity = 77/196 (39.29%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL----ALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYK--QDLTLQEAET 647 R +YD + TFSP GR+ Q+EYA+EA+K G A+ LK+K+ VL KR +S L S +KI +D+H+G A+SGL ADAR L + R E N+ + Y M VE + D R+G RP+GV LL+AG D+ G +Y T PSG F+ + +IGS S+ A + L++ ++ ++ TL++ T Sbjct: 3 RNQYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSEL--GSYQKKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHTQRYGR-------RPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFEECTLEQLIT 189
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.879e-30 Identity = 68/188 (36.17%), Postives = 114/188 (60.64%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD---LALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 YD V+T+SP+G+LFQV+YA +A++ T + +K K+GVVL VEK + S +L S ++ ID H+G A++G +ADAR L+ AR E +N++ +YG+P+ ++ +Q + + +G RPFG S+ I G D+ GP L+ +PSG+ ++G G + A + L++ ++T +EA Sbjct: 8 YDLYVSTYSPDGKLFQVDYANKAVENSGTLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGS------VRPFGCSIAITGIDQYGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEKIKFSEMTCREA 189 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |