FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.453e-30 Identity = 71/192 (36.98%), Postives = 106/192 (55.21%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 T YD V TFSP+GR+FQ+EYA +A+ TA+G+K K+G+VL VEK I S ++ P S +I + H G A++GL AD R +V A+ E N+ YGE + V+ LC L RPFG +++ G D +GP LY +PSG ++ AIG G + A + +++ ++T +E Sbjct: 6 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTAVGIKCKDGIVLGVEKLIQSKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVARAKSEATNYESVYGEAVPVKELADRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCRE 188
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.453e-30 Identity = 74/185 (40.00%), Postives = 105/185 (56.76%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 Y + TFSP G+L Q+EYA+ A+ G+ ++G+K GVVLA EK+ S L + S K+ I +HIG SG+ D R LV AR Q + Y EP+ T Q + +A E + RPFGVSLLIAG DE P L+ +DPSG ++ A A+G + L+++Y +DL L++A Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPI---PTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.466e-30 Identity = 75/191 (39.27%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSL-LIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 +DR + FSPEGRL+QVEYA +AI + T + LK+ + V+A +K++T + P +V + I + IGCAM+G IAD+R+ V+ AR E N R+ YG M V+ + + D+ + + E RP G S+ LIA +E GPS+Y TDP+G F A ++G+ + A+S L+++YK +L+ ++A +A Sbjct: 9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAE---MRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLA 196
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.466e-30 Identity = 72/185 (38.92%), Postives = 104/185 (56.22%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 Y + TFSP G+L Q+EYA+ A+ G+ ++G+ GVV+A E + SPL E SV ++ I HIG SG+ D R LV+ AR Q + +Y EP+ V Q + L E + RPFGVSLLI G D + P LY +DPSG ++ A A+G + + L+++Y +DL L +A Sbjct: 6 YSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATL---MQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.138e-30 Identity = 74/187 (39.57%), Postives = 107/187 (57.22%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 T YD G+ FSP+GRLFQ EYA +A++ ST IG+K ++GV+LA+EK +TS LL+P +I +D HIG A +G I D + +V+ AR E + R +YG P+ L + F S RPFGV +A D GP LY +P+G +W N A G G + A + L++ L +++A Sbjct: 6 TGYDLGL-FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLF---TCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDA 188
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.323e-30 Identity = 73/190 (38.42%), Postives = 112/190 (58.95%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKL-GSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETI 650 YDR + FSPEGRLFQVEYA +A+K G T+IG++ K+ V + +K++ LL+ +SV + I +++G +G+ ADARTLV+ AR E RF YG M V+ ++ + D + + + + RP GV +I G D E GP L+ DP+G F+ A + GS + A + L+++ K D ET+ Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVY---TQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETV 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.323e-30 Identity = 70/192 (36.46%), Postives = 107/192 (55.73%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 T YD V TFSP+GR+FQVEYA +A+ T +G+K K+G+VL VEK +TS ++ S +I + H G A++GL AD R +V A+ E ++ YGEP++V+ LC L RPFG +++ G D +GP LY +PSG ++ A+G G + A + +++ +LT +E Sbjct: 6 TGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCRE 188
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_YEAST (Proteasome component Y7 OS=Saccharomyces cerevisiae GN=PRE8 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.323e-30 Identity = 77/191 (40.31%), Postives = 114/191 (59.69%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHAR-VETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 Y + TFSP G+L Q++YA+ A+K G T++G+K GVV+A EK+ +SPL ++ K+ + IG SG+ D R LV+ +R V +++ YGE T + ++A E + RPFGVSLLIAG DE NG SLY DPSG+++ A AIG GS A + L++++ +L L++A IA Sbjct: 5 YSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGE---YPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIA 192
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA73_DROVI (Proteasome subunit alpha type-7-1B OS=Drosophila virilis GN=Pros28.1B PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.218e-29 Identity = 76/177 (42.94%), Postives = 107/177 (60.45%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQE 608 + +D VN +S +G L QVEYA EA++ GST +GL+TKE VVL VEKR L + KI +ID+H+ +GL ADAR LV A+VE Q+HR ++ P +VE T+ L L + + RPFGVS LI G DE+G P L+ TDPSG +++ +A G + + L++ Sbjct: 2 SRFDESVNIYS-DGHLLQVEYAQEAVRKGST-VGLRTKECVVLGVEKRAIDSLQIERTSRKIKKIDQHMAMTFAGLTADARVLVSRAQVEAQSHRLNFDRPASVEYITRYLARLKQTY---TQSVARRPFGVSCLIGGFDEDGRPRLFQTDPSGIYYEWSANTTGRLGQTVNEYLEK 173
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA4_RAT (Proteasome subunit alpha type-4 OS=Rattus norvegicus GN=Psma4 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.590e-29 Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ-DLTLQEAETIA 653 YD FSPEGRL+QVEYA+EAI T +G+ +GV+LA E+R LL E EKI +++E + C+++G+ +DA L R+ Q + Y EP+ E ALCD+ + + RPFGVSLL G D++ G LY +DPSG + A IG+ S A S L++ YK+ ++TL+ A +A Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAY---TQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALA 193 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |