FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.713e-29 Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 Y + TFSP G+L Q+EYA+ A+ G+ ++G+K GVVLA EK+ S L + SV K+ I +HIG SG+ D R LV AR Q + Y EP+ T Q + +A E + RPFGVSLLI G +E P L+ +DPSG ++ A A+G + L+++Y +DL L++A Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPI---PTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA4_MACFA (Proteasome subunit alpha type-4 OS=Macaca fascicularis GN=PSMA4 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.543e-29 Identity = 76/192 (39.58%), Postives = 111/192 (57.81%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ-DLTLQEAETIA 653 YD FSPEGRL+QVEYA+EAI T +G+ +GV+LA E+R LL E EKI +++E + C+++G+ +DA L R+ Q + Y EP+ E ALCD+ + + RPFGVSLL G D++ G LY +DP+G + A IG+ S A S L++ YK+ ++TL+ A +A Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAY---TQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPNGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALA 193
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 4.627e-29 Identity = 71/190 (37.37%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGT---FWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 T YD +TFSP+GR+FQVEYA++A++ STAIG++ K+GVV VEK + S L E S +++ +D H+G A++GL+ADAR+L + AR E N R ++G + ++ +A+ S RPFG S ++ S +G LY DPSG +W C AIG + A + +++ +++T ++ Sbjct: 6 TGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADR---VAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGC---AIGKARQAAKTEIEKLQMKEMTCRD 189
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29 Identity = 71/190 (37.37%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGT---FWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 T YD +TFSP+GR+FQVEYA++A++ STAIG++ K+GVV VEK + S L E S +++ +D H+G A++GL+ADAR+L + AR E N R ++G + ++ +A+ S RPFG S ++ S +G LY DPSG +W C AIG + A + +++ +++T ++ Sbjct: 6 TGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADR---VAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGC---AIGKARQAAKTEIEKLQMKEMTCRD 189
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29 Identity = 71/190 (37.37%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGT---FWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 T YD +TFSP+GR+FQVEYA++A++ STAIG++ K+GVV VEK + S L E S +++ +D H+G A++GL+ADAR+L + AR E N R ++G + ++ +A+ S RPFG S ++ S +G LY DPSG +W C AIG + A + +++ +++T ++ Sbjct: 6 TGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADR---VAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGC---AIGKARQAAKTEIEKLQMKEMTCRD 189
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29 Identity = 71/190 (37.37%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGT---FWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 T YD +TFSP+GR+FQVEYA++A++ STAIG++ K+GVV VEK + S L E S +++ +D H+G A++GL+ADAR+L + AR E N R ++G + ++ +A+ S RPFG S ++ S +G LY DPSG +W C AIG + A + +++ +++T ++ Sbjct: 6 TGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADR---VAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGC---AIGKARQAAKTEIEKLQMKEMTCRD 189
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1_PONAB (Proteasome subunit alpha type-1 OS=Pongo abelii GN=PSMA1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.296e-28 Identity = 70/185 (37.84%), Postives = 103/185 (55.68%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL----ALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ 620 R +YD V +SP+GR+ Q+EYA+EA+K GS +GLK+K VL KR S L + +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ + Sbjct: 3 RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL--AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSE 178
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1_MOUSE (Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.296e-28 Identity = 70/185 (37.84%), Postives = 103/185 (55.68%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL----ALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ 620 R +YD V +SP+GR+ Q+EYA+EA+K GS +GLK+K VL KR S L + +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ + Sbjct: 3 RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL--AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSE 178
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1_HUMAN (Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.296e-28 Identity = 70/185 (37.84%), Postives = 103/185 (55.68%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL----ALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ 620 R +YD V +SP+GR+ Q+EYA+EA+K GS +GLK+K VL KR S L + +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ + Sbjct: 3 RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL--AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSE 178
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1_BOVIN (Proteasome subunit alpha type-1 OS=Bos taurus GN=PSMA1 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.296e-28 Identity = 70/185 (37.84%), Postives = 103/185 (55.68%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL----ALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ 620 R +YD V +SP+GR+ Q+EYA+EA+K GS +GLK+K VL KR S L + +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ + Sbjct: 3 RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL--AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSE 178 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |