FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.478e-22 Identity = 61/190 (32.11%), Postives = 102/190 (53.68%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLL-IAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETI 650 +DR + FSPEGR++QVEYA +AI + TA+ +K + V+AV+KR+ L+ +V + +I + +GC G+I DA+ ++ A+ E + ++ G M E + + DL + + E R G +LL I+ DE GP +Y DP+G + ++G A S L+++ K+ L E I Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAE---MRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAI 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.551e-21 Identity = 59/180 (32.78%), Postives = 96/180 (53.33%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAI-KLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ 620 YDR + FSPEGRL+QVEYA +A + ++ ++ K+ V+ +K++ LL+P++V I I IG ++G I DAR A+ E R+ YG M + + + +L+ + + + RP GV L DE GPS+Y TDP+G + A A G + ++L+ +K+ Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIY---TQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKK 188
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_CAEEL (Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7 PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 5.669e-19 Identity = 53/187 (28.34%), Postives = 101/187 (54.01%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGV-SLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 T YD +TFSP+GR+FQVEYA +A+ T I ++ K GVV+ +K I+S L ++ ++ +++++G A++G D L +A E Y EPM +++ ++ + G +SRPFG + ++ + + G L+ +PSG ++ A A+G + A + +++ ++L + + Sbjct: 6 TGYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLG----ISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQ 188
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.263e-18 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 165 GSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 G+T +G+ K+GVV A E+R + L+ + +KI +IDEHI ++G +ADA++L+++ + E +R E +++E+ ++ S PF V L+ G DENG +Y DPSG + GSGS A L+++Y +L + EA +A Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANIL-------HSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVA 165
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.930e-17 Identity = 52/165 (31.52%), Postives = 89/165 (53.94%), Query Frame = 3 Query: 165 GSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDP-SGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 G+T +G+ +G+VLA E+R T + + +K+ +ID+ +G +G + DA+ LV VE+Q ++ E MT++ T + + R + P V LLI G D+NGP +Y D G+ + A GSGS A L++QY++++T++E +A Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSR-------NRYYPMMVQLLIGGVDKNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLA 166
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16 Identity = 61/176 (34.66%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 102 NTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL-AVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD-LALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQD 623 NTF+ EGRL QVE+AI+ + T IG +GVVL V K T+ +EKI ++ + I C + GL DA L +AR++ Q +G VE LC + R + + +RPFGVS L AG + +L TDPSGT + G E + L+ + +D Sbjct: 9 NTFTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKEPTN-----GPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFG----VECPLTTLCKFVGQRKQAFTQYAGTRPFGVSFLYAGVIDGKYALMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPED 175
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16 Identity = 54/205 (26.34%), Postives = 103/205 (50.24%), Query Frame = 3 Query: 72 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKL-GSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG------PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYK----QDLTLQEAETIA 653 ++R +D+ + FSPEG L+QVEYA +A+ G + ++ K+ V++ + + L+ P ++ + ++++ G ++G D + LV+ AR E +++ YG PM V + D+A +++ R G + G ++N P +Y DP+G +A A+G A + L+++ K L+ +EA IA Sbjct: 1 MSRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMA---QVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGA-AVHACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIA 201
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB10_RAT (Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.219e-14 Identity = 50/167 (29.94%), Postives = 83/167 (49.70%), Query Frame = 3 Query: 153 AIKLGSTAIGLKTKEGVVLAVEKRITSP-LLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETI 650 A K G+T GL ++GV+L + R T+ ++ S EKI I I C +G+ AD A + + H S G V + T+ L R+ G SL++ G D NGP LY P G++ + A+GSG + A + L+++++ ++TL+ A+ + Sbjct: 35 ARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRY--------QGHVGASLIVGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQEL 193
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.223e-13 Identity = 50/167 (29.94%), Postives = 82/167 (49.10%), Query Frame = 3 Query: 153 AIKLGSTAIGLKTKEGVVLAVEKRITSP-LLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETI 650 A K G+T GL ++GV+L + R T+ ++ S EKI I I C +G+ AD A + + H S G V + T+ L R+ G SL++ G D NGP LY P G++ + A+GSG A + L+++++ ++TL+ A+ + Sbjct: 35 ARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRY--------QGHVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQEL 193
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.725e-13 Identity = 49/167 (29.34%), Postives = 81/167 (48.50%), Query Frame = 3 Query: 153 AIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSV-EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETI 650 A K G+T GL ++GV+L + R T+ + + EKI I I C +G+ ADA A + H S G V + T+ L R+ G SL++ G D GP LY P G++ + A+GSG + A + L+++++ ++TL+ A+ + Sbjct: 35 ARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRY--------QGYVGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQEL 193 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |