FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13 Identity = 52/164 (31.71%), Postives = 82/164 (50.00%), Query Frame = 3 Query: 165 GSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 G+T +G+ K+GVVLA ++R + ++ +V KI +IDEH+ A +G + D LV R E + + G+ M+V++ L ++ + P+ L+ G DE P LY D G + GSG E A S L +YK +LTL+E +A Sbjct: 10 GTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIM-------NGAKYFPYLAWFLVGGYDEK-PKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLA 165
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB10_HUMAN (Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13 Identity = 49/165 (29.70%), Postives = 81/165 (49.09%), Query Frame = 3 Query: 153 AIKLGSTAIGLKTKEGVVLAVEKRITSP-LLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAE 644 A K G+T GL ++GV+L + R T+ ++ S EKI I I C +G+ ADA + + H S G V + T+ L R+ G SL++ G D GP LY P G++ + A+GSG + A + L+++++ ++TL+ A+ Sbjct: 35 ARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRY--------QGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQ 191
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.036e-12 Identity = 50/164 (30.49%), Postives = 84/164 (51.22%), Query Frame = 3 Query: 165 GSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 G+T +GL KEGVVLA + R + ++ +V KI +IDEH+ A +G + D LV + E ++ + G+ M+V++ L ++ S P+ L+ G DE P L+ D G + N A GSG E A S L +Y++++++ + +A Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANIL-------NGSKYFPYLGWFLVGGYDEK-PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLA 165
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.353e-12 Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 3 Query: 165 GSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 G+T +G+ +GVVLA ++R + ++ +V KI +IDEH+ A +G + D LV R E + + G+ M+V++ L ++ + P+ L+ G DE P LY D G + A GSG E A S L +Y++DL ++E IA Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANML-------NGARMLPYLAWFLVGGFDEK-PRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIA 165
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.935e-12 Identity = 51/175 (29.14%), Postives = 91/175 (52.00%), Query Frame = 3 Query: 144 AIEAIK--LGSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSL--LIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 A+E +K G+T + KEGV++A + R + + SV+KI+EI+ ++ M+G AD + + ++ + H + ++V ++ L ++ + R G+S+ +IAG DE GP LYY D G + + ++GSGS A L YK D++++EA +A Sbjct: 48 AVEMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSY---------RGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELA 213
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMB_THEAC (Proteasome subunit beta OS=Thermoplasma acidophilum GN=psmB PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 42/164 (25.61%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 150 EAIKLGSTAIGLKTKEGVVLAVEKRITSP-LLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 + ++ G+T +G+ K+ V++A E+R+T + + +K+ +ID + G ++GL+ DA+ LV + + E + +R M +E+ L ++ + P+ V LL+ G D P ++ D +G + + GSGS L+ QY + +T+ E Sbjct: 3 QTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNML-------NQVKYMPYMVQLLVGGID-TAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDE 158
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB8_RAT (Proteasome subunit beta type-8 OS=Rattus norvegicus GN=Psmb8 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 48/166 (28.92%), Postives = 86/166 (51.81%), Query Frame = 3 Query: 165 GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSL--LIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 G+T + K + GV++AV+ R ++ + V K++EI+ ++ MSG AD + E + + GE ++V + ++ L ++ L++ R G+S+ +I G D+ GP LYY D +GT + GSG+ A + Y+QDL+ +EA +A Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQY---------RGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLA 228
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 48/163 (29.45%), Postives = 79/163 (48.47%), Query Frame = 3 Query: 156 IKLGSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 +K G+T +G+ K GVVL + R T P++ + EKI I ++I C +G AD + + + H+ S G+ V + L + ++ +L++ G D NGPSL+ P G+ Q +GSGS A + + +YK D+T +EA Sbjct: 31 MKTGTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCGAGTAADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKY--------QGHISAALILGGIDINGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEA 185
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB8_MOUSE (Proteasome subunit beta type-8 OS=Mus musculus GN=Psmb8 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12 Identity = 47/162 (29.01%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 165 GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSL--LIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 G+T + K + GV++AV+ R T+ + + K++EI+ ++ MSG AD + E + + GE ++V + ++ L ++ L++ R G+S+ +I G D+ GP LYY D +GT + GSG+ A + Y+QDL+ +EA Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQY---------RGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEA 224
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12 Identity = 53/180 (29.44%), Postives = 92/180 (51.11%), Query Frame = 3 Query: 129 FQVEYAIEAIK--LGSTAIGLKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSL--LIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 FQ E A++ +K G+T + K GV++A + R + + SV+KI+EI+ ++ M+G AD + + ++ + H + ++V ++ L ++ + R G+S+ +IAG DE GP LYY D G + ++GSGS A L YK D+T++EA +A Sbjct: 42 FQKE-AVQMVKPAKGTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNY---------RGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELA 211 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |