FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.885e-47 Identity = 98/194 (50.52%), Postives = 130/194 (67.01%), Query Frame = 3 Query: 72 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 L YDR + FSP+GRLFQVEYA EA+K G+T+IG+K EG+VLAV+KR TS L+E +S+EKI +IDEHIG A SGL+ADAR LVE ARVE Q ++ +Y EP+ V+S ++ LCD+ + + RPFG +L+I G + L+ TDPSG + A AIGSG A ++QYK D+ L EA +A Sbjct: 4 LQNAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMY---TQNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAINLA 194
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.921e-47 Identity = 94/189 (49.74%), Postives = 133/189 (70.37%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K+GVVLAV++RITS L++ SS+EKI +ID+HI A SGL+ADAR L++ ARVE Q +R SYGE +TVE+ + +CD+ + +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+E+Y +++++ E +A Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAY---THHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.427e-47 Identity = 92/189 (48.68%), Postives = 129/189 (68.25%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+GRLFQVEYA EA+K G+T++G+K+KEG+VL V+KR TS L+EP S+EKI +IDEHIG A SGL+ADAR ++E AR+E Q +R +Y EP+ VES + +CD+ + + RPFG +L+I G + G L+ TDPSG + A AIG+G A +++Y D+ L +A +A Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMY---TQHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELA 194
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.427e-47 Identity = 93/189 (49.21%), Postives = 133/189 (70.37%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K+GVVLAV++RITS L++ SS+EKI +ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ + + +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y +++T+ E +A Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAY---TQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 8.393e-47 Identity = 93/189 (49.21%), Postives = 133/189 (70.37%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K+GVVLAV++RITS L++ SS+EKI +ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ + + +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y +++T+ E +A Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---TQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.096e-46 Identity = 98/189 (51.85%), Postives = 130/189 (68.78%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+GRLFQV YA EA+K G+TA+G+K KEGVVLAVEKRITS L+EPSS EKI +ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL + RPFG +LL+AG ++ P LY TDPSG +++ A AIGSG A + ++ Y DL ++ A +A Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAH---TQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLA 194
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.432e-46 Identity = 93/189 (49.21%), Postives = 131/189 (69.31%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSPEGRL+QVEYA EA++ G+TAIG+ K+GVVLAV++RITS L++ S+EKI +ID+H+ A SGL+ADAR L++ AR+E Q +R +YGE +++E + +CD+ + + RPFGVSLLIAG D+N L+ TDPSG + A AIGSG L+++Y+ D+TL E +A Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAY---TQHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELA 194
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.870e-46 Identity = 98/189 (51.85%), Postives = 128/189 (67.72%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+GRLFQV YA EA+K G+TA+G+K EGVVLAVEKRITS L+EP S EKI +ID+HI A SG+IADAR LV AR+E Q +R +YGEP V + +CDL + RPFG +LL+AG ++ P LY TDPSG ++ A AIGSG A + +E+Y+ D+ L++A +A Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMH---TQYGGVRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLA 194
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.870e-46 Identity = 94/185 (50.81%), Postives = 127/185 (68.65%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +GVVL V+KRITS L+E S+EKI +ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD + + RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + +Y+QD+ + A Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAA 190
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.870e-46 Identity = 94/185 (50.81%), Postives = 126/185 (68.11%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +GVVL V+KRITS L+E S+EKI +IDEHIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD + + RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + Y++D+ + A Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAA 188 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |