FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.482e-43 Identity = 92/185 (49.73%), Postives = 122/185 (65.95%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 YDR + FSP+GRL+QVEYA EA+K G+TA+G+K +GVVL V+KR++S LLE SS+EKI +IDEHIG A SGL+ DAR LV+ AR+E Q +R SY E + VE+ + LCD + RP+G +LLIAG + L+ TDPSGT + A IG G A +E+Y DL L++A Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCD---HMQTLTQYGGIRPYGTALLIAGVSDGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLALKDA 190
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.630e-43 Identity = 88/185 (47.57%), Postives = 124/185 (67.03%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 YDR + FSP+GRL+QVEYA EA+K G+TA+G+K +G+VL V+KR+ S LLEPSS+EKI +ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY E + VE ++ LCD + + +RP+G +LLIAG + L+ TDPSGT + A IG G +E+Y + ++++A Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTY---TQFGGARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYNPEASIRDA 190
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.766e-42 Identity = 83/183 (45.36%), Postives = 127/183 (69.40%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQ 635 YDRG+ FSP+GRL+QVEYA EA+K G+ ++G++T++GVV+A ++ SPL+E S+EKI EID H+G A +G +ADAR L++ AR ++Q +R Y EP +VES T+ + D ++ + +RPFGV+LL+AG ++ P L+ TDPSGT ++ A AIG E + L+E+Y + + L+ Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQY---TQTGGARPFGVALLVAGIEDGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLE 188
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.766e-42 Identity = 92/201 (45.77%), Postives = 131/201 (65.17%), Query Frame = 3 Query: 51 NQQQNMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 NQQQ YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T +GVVLAV+KRI SPL+E SSVEKI + D+HIG A +G +ADAR L++ AR + Q ++ YGEP+ VE+ T+ + D ++ + +RPFGV+L+I G P L+ TDPSGT ++ A A+G+ L+E Y + + L E +A Sbjct: 5 NQQQ-------AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQY---TQVGGARPFGVALIIGGIVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.130e-42 Identity = 83/189 (43.92%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ YK+DLT+++ +A Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.130e-42 Identity = 83/189 (43.92%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ YK+DLT+++ +A Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.130e-42 Identity = 83/189 (43.92%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ YK+DLT+++ +A Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.130e-42 Identity = 83/189 (43.92%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ YK+DLT+++ +A Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.130e-42 Identity = 83/189 (43.92%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ YK+DLT+++ +A Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.130e-42 Identity = 83/189 (43.92%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ YK+DLT+++ +A Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLA 195 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |