FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.416e-40 Identity = 89/191 (46.60%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + F Y EPM VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG + A A+G+ ++ A S L++ YK D T +EA +A Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELA 192
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.695e-39 Identity = 80/187 (42.78%), Postives = 118/187 (63.10%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 +E G+ TFSP GRL Q+EYA A G+TA+G+K +GVV+A EK+ TSPL + ++ K+ +D+H+GC SG+ D R LV+ AR Q +R +Y EPM + +Q + ++ F E + RPFG SLL+AG+D G LY DPSGTFW A +IG GS A + L+++Y ++ +++A Sbjct: 2 SESSYGLTTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPI---SQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDA 185
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.413e-39 Identity = 79/185 (42.70%), Postives = 121/185 (65.41%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 YDR + FSP+GRLFQVEYA EA+K GSTA+G+K K+GV L EK++ S L+E +S+EKI ID+ + SGL+ADAR L++ AR+ Q + +YG M +E+ + + D ++ + RP+GVS++ AG D GP L+ DP+GT + +IG+G + + L+++YK++L+ EA Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQY---TQYGGVRPYGVSIIFAGLDSIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEA 189
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.099e-38 Identity = 80/190 (42.11%), Postives = 117/190 (61.58%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+G L+QV+YA EA+K G T +G+KTK GVVL EKR + LL+ +EKI +D+H+GC +GL +D R L+++AR + HR Y EP+++E T+ + D+ + + RPFGV+L++ G D+ P L T+PSG F A AIG G A L++ YK+DL +Q +A Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAY---TQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKEDLDIQSTILLA 196
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38 Identity = 76/189 (40.21%), Postives = 119/189 (62.96%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR + FSP+G L+QV+YA EA+K G T +G+KTK VV+ EK+ S LL+ S+EK+ +D+H+GC+ +GL +D R L+++AR + HR Y EP++++ T+ + D+ + + RPFGV+L++ G D L+ T+PSG F A AIG G A L++ YK+DL+++E +A Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMY---TQHGGVRPFGVALIVGGVDRGVTKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKEDLSVEETILLA 195
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.453e-38 Identity = 84/189 (44.44%), Postives = 118/189 (62.43%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETI 650 YDR + FSP+G LFQVEYA EA+K GSTA+G++ K+ VVL VEK+ + L E +V KI +DEH+ A +GL ADAR ++ ARVE Q+HR + +P+TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT+ A AIG ++ L++ Y + + + I Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAI 190
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.302e-38 Identity = 83/180 (46.11%), Postives = 116/180 (64.44%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQD 623 YDR + FSP+G LFQVEYA EA+K GSTA+G++ KE VVL VEK+ + L + +V KI +DE++ A +GL ADAR ++ ARVE Q+HR + +P+TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT+ A AIG G++ L++ Y + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDE 179
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.302e-38 Identity = 83/180 (46.11%), Postives = 116/180 (64.44%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQD 623 YDR + FSP+G LFQVEYA EA+K GSTA+G++ KE VVL VEK+ + L + +V KI +DE++ A +GL ADAR ++ ARVE Q+HR + +P+TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT+ A AIG G++ L++ Y + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDE 179
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSMA2_HALVO (Proteasome subunit alpha 2 OS=Halobacterium volcanii GN=psmA2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.215e-37 Identity = 79/189 (41.80%), Postives = 119/189 (62.96%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDRG + FSP+GR++QVEYA EA+K G+ +G++T +GVVLA + S L+E S+EK+ ++D+ +G A +G +ADAR LV+ AR Q YGEP+ VE+ T+ + D E + +RP+G SLLI G + L+ TDPSGT + A AIG E ++L++ Y +DL+L++ +A Sbjct: 9 YDRGTSLFSPDGRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAATAGHVADARKLVDFARTTAQREHLRYGEPIGVETLTKTITD---NIQESTQSGGTRPYGASLLIGGVENGSGRLFATDPSGTPQEWKAVAIGGHREDVQAALEDGYAEDLSLEDGLALA 194
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.587e-37 Identity = 82/180 (45.56%), Postives = 116/180 (64.44%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQD 623 YDR + FSP+G LFQVEYA EA+K GSTA+G++ K+ VVL VEK+ + L + +V KI +D+++ A +GL ADAR ++ ARVE Q+HR + +P+TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT+ A AIG G++ L++ Y D Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDD 179 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |