FC923113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PROM2 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ndk PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 3.397e-40 Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTFIAIKPDGVQRG ++EII RFE+KGFKLV +K ++PSK+ AQ HY +ERPFF L +F+SSGPV+AMVWEGEGVI RKLIGAT P ++EPGTIRGDLA+ +GR Sbjct: 4 ERTFIAIKPDGVQRGYVAEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGR 113 HSP 2 Score: 22.3274 bits (46), Expect = 3.397e-40 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 672 KNIIHGSDG 698 +NIIHGSDG Sbjct: 113 RNIIHGSDG 121
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.427e-40 Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 MERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K V PS++ A +HY +ERPFF GL +F++SGPVIAMVWEG+GVI RKLIGAT P +EPGTIRGDLAV +GR Sbjct: 3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGR 113 HSP 2 Score: 21.9422 bits (45), Expect = 4.427e-40 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 672 KNIIHGSDG 698 +N+IHGSDG Sbjct: 113 RNVIHGSDG 121
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.631e-40 Identity = 76/110 (69.09%), Postives = 94/110 (85.45%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ER+FIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+E A++HY KERPFF GL +F++SGPV+AMVWEG+GVIT RK+IGAT P ++EPGTIRGDLA+ +GR Sbjct: 4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGR 113
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.631e-40 Identity = 78/110 (70.91%), Postives = 93/110 (84.55%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTFIAIKPDGVQRGLI EI+ RFERKGFKLV +K + PS+E A++HY KERPFF GL +F++SGPV+AMVWEG+GVI RKLIGAT P ++EPGTIRGDLA+ +GR Sbjct: 4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIGR 113
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 9.792e-40 Identity = 74/110 (67.27%), Postives = 94/110 (85.45%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTF+AIKPDGVQRGL+ EI+SRFERKGFKL+A+K ++PS+ A++HY +ERPFF GL +F++SGPVIAM+WEGEGVI RKLIG+T P ++PGTIRGDLA+ +GR Sbjct: 4 ERTFLAIKPDGVQRGLVGEILSRFERKGFKLIALKQLIPSRALAEQHYGVHRERPFFKGLVDFITSGPVIAMIWEGEGVILGARKLIGSTKPLDADPGTIRGDLAIDIGR 113 HSP 2 Score: 21.9422 bits (45), Expect = 9.792e-40 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 672 KNIIHGSDG 698 +N+IHGSDG Sbjct: 113 RNVIHGSDG 121
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 9.792e-40 Identity = 76/111 (68.47%), Postives = 93/111 (83.78%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 +ERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+E A +HY +ERPFF GL +F++SGPV+AMVWEG+GVI RKLIGAT P ++EPGTIRGDLAV +GR Sbjct: 3 VERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGR 113 HSP 2 Score: 21.9422 bits (45), Expect = 9.792e-40 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 672 KNIIHGSDG 698 +N+IHGSDG Sbjct: 113 RNVIHGSDG 121
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 9.792e-40 Identity = 75/110 (68.18%), Postives = 92/110 (83.64%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTF+AIKPDGVQRG +S+II RFE+KGFKLV +K ++P+K+ AQ HY +ERPFF L EF+SSGPV+AM+WEGEGVI RKLIGAT P ++EPGTIRGDLA+ +GR Sbjct: 4 ERTFLAIKPDGVQRGYVSDIIGRFEKKGFKLVGLKQLIPTKQLAQDHYGVHRERPFFKDLVEFISSGPVVAMIWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGR 113 HSP 2 Score: 22.3274 bits (46), Expect = 9.792e-40 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 672 KNIIHGSDG 698 +NIIHGSDG Sbjct: 113 RNIIHGSDG 121
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.929e-39 Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTFIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+ A++HY KERPFF GL +F++SGPV+AMVWEG+GVI RKLIGAT P ++EPGTIRGDLAV +GR Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGR 112
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.929e-39 Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTFIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+ A++HY KERPFF GL +F++SGPV+AMVWEG+GVI RKLIGAT P ++EPGTIRGDLAV +GR Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGR 112
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PROM5 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=ndk PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.166e-39 Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTF+AIKPDGVQRG I+EII RFE+KGFKLV +K ++PSK+ AQ HY +ERPFF L F+SSGPV+AM+WEGEGVI RK+IGAT P ++EPGTIRGDLA+ +GR Sbjct: 4 ERTFLAIKPDGVQRGYIAEIIGRFEKKGFKLVGLKQLIPSKQLAQDHYGVHRERPFFKDLVNFISSGPVVAMIWEGEGVILSARKIIGATKPLEAEPGTIRGDLAIDIGR 113 HSP 2 Score: 22.3274 bits (46), Expect = 2.166e-39 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 672 KNIIHGSDG 698 +NIIHGSDG Sbjct: 113 RNIIHGSDG 121 The following BLAST results are available for this feature:
BLAST of FC923113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923113 ID=FC923113; Name=FC923113; organism=Citrus clementina; type=EST; length=699bpback to top |