FC923113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_STRM5 (Nucleoside diphosphate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERT IKPD V + +I EI +RFE+ G K+VA K S+ A+ Y +ERPFFN L EF+ SGPV+ EGE + R L+GAT+P+++ PGTIR D A Sbjct: 3 LERTLSIIKPDAVAKNVIGEIYARFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVLAHRDLLGATNPKEAAPGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PARD8 (Nucleoside diphosphate kinase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVV 669 ME+T + +KP VQRGLI EI++RFE+KG +L +K+V + E +HY LKE+PFF + + +S PVI WEG I R L G T+ + + PGTIRGD ++ V Sbjct: 1 MEKTLVILKPCTVQRGLIGEIVTRFEKKGLRLAGMKMVWLTDEILSEHYAHLKEKPFFQRIKDAMSVCPVIVCCWEGVDAIHVVRTLAGTTNGRNAAPGTIRGDYSMSV 109
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_HALHL (Nucleoside diphosphate kinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 51/106 (48.11%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERT IKPD V + I EI++RFER G ++VA ++V S E A+ Y KERPFFN L F++SGPV+ V EGE I R+++GAT+P+++ GT+R D A Sbjct: 3 VERTLSIIKPDAVAQNAIGEILARFERSGLRVVAARMVRLSTEQAESFYAVHKERPFFNDLVGFMTSGPVMVQVLEGEDAIRKNREIMGATNPKEAAAGTLRHDFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_GEOBB (Nucleoside diphosphate kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVV 669 MERTF IKPD V+R + ++++ E GFK+V +K + SK A+ Y+ KERPFF LC F+S GPVIA+V E E I R L+GAT+P +E GTIR L V + Sbjct: 1 MERTFAIIKPDAVERNVTGKVLAMIEEGGFKIVGMKKIRLSKCQAEGFYYVHKERPFFGDLCAFMSRGPVIALVLEKENAIADWRGLMGATNPANAEAGTIRKALGVSI 109
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_BURCM (Nucleoside diphosphate kinase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERT IKPD V + +I +I SRFE G K+VA ++ S+ A+K Y RPFF L +F+ SGPV+ V EGEG I R L+GATDP+K+E GTIR D A Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRGDAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_BURA4 (Nucleoside diphosphate kinase OS=Burkholderia ambifaria (strain MC40-6) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERT IKPD V + +I +I SRFE G K+VA ++ S+ A+K Y RPFF L +F+ SGPV+ V EGEG I R L+GATDP+K+E GTIR D A Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVASRMAHLSRGDAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_STRT2 (Nucleoside diphosphate kinase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=ndk PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.176e-20 Identity = 45/106 (42.45%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 M++TF IKPD V+R LI +++ R ER+GF + +++++ +E ++HY L ++PFF + EF+ SGP + + G GVI R ++GAT+P + PGTIRGD A Sbjct: 1 MQKTFFIIKPDAVKRHLIGQVLDRIERRGFVIERMEMLMLDEERLKEHYAQLADKPFFPSISEFMMSGPAVIGIMSGPGVIKSWRDMMGATNPGDAAPGTIRGDFA 106
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_STRT1 (Nucleoside diphosphate kinase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=ndk PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.176e-20 Identity = 45/106 (42.45%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 M++TF IKPD V+R LI +++ R ER+GF + +++++ +E ++HY L ++PFF + EF+ SGP + + G GVI R ++GAT+P + PGTIRGD A Sbjct: 1 MQKTFFIIKPDAVKRHLIGQVLDRIERRGFVIERMEMLMLDEERLKEHYAQLADKPFFPSISEFMMSGPAVIGIMSGPGVIKSWRDMMGATNPGDAAPGTIRGDFA 106
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_ROSDO (Nucleoside diphosphate kinase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.176e-20 Identity = 51/113 (45.13%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRTS 681 +ERTF IKPD +R L +I ++FE G ++VA K + +K A Y ERPF++ LCEF++S PV+ V EGEG I R+++GAT+P + PGTIR + A VG S Sbjct: 3 LERTFSIIKPDATRRNLTGKINAKFEEAGLRIVAQKRIHMTKAQAGVFYAVHAERPFYDELCEFMASAPVVVQVLEGEGAIAKNREVMGATNPADAAPGTIRAEFAESVGENS 115
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_RHOBA (Nucleoside diphosphate kinase OS=Rhodopirellula baltica GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.176e-20 Identity = 47/104 (45.19%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGD 654 M+RT + +KPD VQR LI +++SRFE KG +VA+K++ + E +++HY + E+PF+ L EF++S PV+A+ EG VI R ++GAT+ ++ PGT+RGD Sbjct: 1 MQRTLVLLKPDCVQRRLIGDVLSRFEAKGLHIVAMKLLQVTPELSKQHYAEHVEKPFYPSLEEFITSAPVVAIALEGLEVIRVVRDMLGATNGLQAAPGTLRGD 104 The following BLAST results are available for this feature:
BLAST of FC923113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923113 ID=FC923113; Name=FC923113; organism=Citrus clementina; type=EST; length=699bpback to top |