FC923113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_COXB1 (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ndk PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20 Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERT IKPD V + +I +I SRFE+ G K+++ K+ SK A+K Y K+RPF+ L +F++ GPV+ V EGE I R+++GAT+P+++ PGTIR D A Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYSRFEKAGLKIISAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_CHRVO (Nucleoside diphosphate kinase OS=Chromobacterium violaceum GN=ndk PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERT +KPD V + +I +I RFE G K+VA K+ S+ A+ Y KERPFF L +F+ SGPV+ EGE + R+L+GATDP+K+E GTIR D A Sbjct: 3 IERTLSIVKPDAVAKNVIGKIYDRFESAGLKIVAAKMKQLSRAEAEGFYAVHKERPFFKDLVDFMVSGPVMIQALEGENAVLKNRELMGATDPKKAEAGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_BURXL (Nucleoside diphosphate kinase OS=Burkholderia xenovorans (strain LB400) GN=ndk PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20 Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERT IKPD V + +I +I +RFE G K+VA ++V S+ A+K Y RPFF L +F+ SGPV+ EGE I R L+GATDP+K+E GTIR D A Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYTRFENAGLKIVASRMVHLSRADAEKFYAVHAARPFFKDLVDFMISGPVVVQALEGENAILKHRDLMGATDPKKAEKGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_YERE8 (Nucleoside diphosphate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ndk PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERTF IKP+ V + I I +RFE GFK++A K++ +KE A+ Y + K RPFF+GL EF++SGPV+ V EGE + R ++GAT+P + GT+R D A Sbjct: 3 VERTFSIIKPNAVAKNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPVMIQVLEGENAVQRHRDIMGATNPDNALAGTLRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_TREPS (Nucleoside diphosphate kinase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=ndk PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 44/106 (41.51%), Postives = 72/106 (67.92%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAV 663 E TF+ +KP +QR L+ E++SRFERKG L A++++ A+ HY + +E+PF+ L +++S PV+A+ ++GE I+ R L G+T + ++PGTIRGD A+ Sbjct: 4 ETTFVMLKPGVLQRRLVGEVLSRFERKGLVLTALRLLCVDTATAELHYAEHREKPFYPSLIAYITSAPVVALAFKGENAISLVRTLCGSTRVEHAQPGTIRGDFAL 109
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_TREPA (Nucleoside diphosphate kinase OS=Treponema pallidum GN=ndk PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 44/106 (41.51%), Postives = 72/106 (67.92%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAV 663 E TF+ +KP +QR L+ E++SRFERKG L A++++ A+ HY + +E+PF+ L +++S PV+A+ ++GE I+ R L G+T + ++PGTIRGD A+ Sbjct: 4 ETTFVMLKPGVLQRRLVGEVLSRFERKGLVLTALRLLCVDTATAELHYAEHREKPFYPSLIAYITSAPVVALAFKGENAISLVRTLCGSTRVEHAQPGTIRGDFAL 109
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_STRZP (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae (strain P1031) GN=ndk PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVP-SKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRTSFME 690 ME+TF IKPDGV+RGL+ E++ R E++GF + ++ S+E +HY DL + F+ + EF++SGPV+ V G VI R ++GAT P+++ PGTIRGD A G ++ Sbjct: 1 MEQTFFIIKPDGVKRGLVGEVLKRIEQRGFTIEKLEFRSQVSEELIDQHYQDLVGQSFYPPIREFMTSGPVLVGVISGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEVIQ 117
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_STRGG (Nucleoside diphosphate kinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ndk PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKG-FKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVV 666 +RT + +KPD V+RGLI EI+ R ERK +++ A+++ ++HY + K RPF+ L EF+ SGPV+A+V EGE VI R L G TDP + PG+IRGD + Sbjct: 3 QRTLVLLKPDAVRRGLIGEIVGRIERKADWRITALELRTLDHGTLEQHYGEHKGRPFYEPLMEFMQSGPVVALVAEGERVIEGVRTLAGPTDPIAAAPGSIRGDFGTI 110
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PSEE4 (Nucleoside diphosphate kinase OS=Pseudomonas entomophila (strain L48) GN=ndk PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 ++RTF IKPD V + +I +I +RFE G K+VA KI SK A+ Y + R FF L F++SGPV+ V EGE I R+L+GAT+P+++ PGTIR D A Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSARGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAPGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_PROMH (Nucleoside diphosphate kinase OS=Proteus mirabilis (strain HI4320) GN=ndk PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 ++RTF IKP+ V++ +I I +RFE GF +VA K++ ++E A+ Y + K RPFF+GL EF++SGP++ V EGE I R L+GAT+P + GT+R D A Sbjct: 3 IQRTFSIIKPNAVKKNVIGAIYNRFESAGFSIVAAKMLHLTREQAEGFYEEHKGRPFFDGLVEFMTSGPIMVQVLEGENAIQRHRDLMGATNPDNALAGTLRADYA 108 The following BLAST results are available for this feature:
BLAST of FC923113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923113 ID=FC923113; Name=FC923113; organism=Citrus clementina; type=EST; length=699bpback to top |