FC923113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_BRUC2 (Nucleoside diphosphate kinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRTS 681 +ERTF IKPD +R L II++ E G ++VA K V S+ A+ Y K+RPFF L EF+SSGP + V EGE I R+++GAT+P ++ GTIR A+ +G S Sbjct: 3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENS 115
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_BRUAB (Nucleoside diphosphate kinase OS=Brucella abortus GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRTS 681 +ERTF IKPD +R L II++ E G ++VA K V S+ A+ Y K+RPFF L EF+SSGP + V EGE I R+++GAT+P ++ GTIR A+ +G S Sbjct: 3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENS 115
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_BRUA2 (Nucleoside diphosphate kinase OS=Brucella abortus (strain 2308) GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRTS 681 +ERTF IKPD +R L II++ E G ++VA K V S+ A+ Y K+RPFF L EF+SSGP + V EGE I R+++GAT+P ++ GTIR A+ +G S Sbjct: 3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENS 115
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_BRUA1 (Nucleoside diphosphate kinase OS=Brucella abortus (strain S19) GN=ndk PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRTS 681 +ERTF IKPD +R L II++ E G ++VA K V S+ A+ Y K+RPFF L EF+SSGP + V EGE I R+++GAT+P ++ GTIR A+ +G S Sbjct: 3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENS 115
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_VIBHB (Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ndk PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 49/113 (43.36%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRTS 681 +ERTF +KPD V+R LI EI R E+ G ++VA K+V ++E A Y + + +PFF L EF++SGP++ V EGE I R+L+G T+P+++ GTIR D A+ + S Sbjct: 3 LERTFSIVKPDAVERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGKPFFPALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAACGTIRADYALSMRHNS 115
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SHESW (Nucleoside diphosphate kinase OS=Shewanella sp. (strain W3-18-1) GN=ndk PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERTF IKPD V + I I +RFE G K+VA K++ +KE A+ Y + ER FF L F++SGP++ V EGE + R+++GAT+P ++ PGTIR D A Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SHESR (Nucleoside diphosphate kinase OS=Shewanella sp. (strain MR-7) GN=ndk PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERTF IKPD V + I I +RFE G K+VA K++ +KE A+ Y + ER FF L F++SGP++ V EGE + R+++GAT+P ++ PGTIR D A Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SHESM (Nucleoside diphosphate kinase OS=Shewanella sp. (strain MR-4) GN=ndk PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERTF IKPD V + I I +RFE G K+VA K++ +KE A+ Y + ER FF L F++SGP++ V EGE + R+++GAT+P ++ PGTIR D A Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SHESA (Nucleoside diphosphate kinase OS=Shewanella sp. (strain ANA-3) GN=ndk PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERTF IKPD V + I I +RFE G K+VA K++ +KE A+ Y + ER FF L F++SGP++ V EGE + R+++GAT+P ++ PGTIR D A Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFA 108
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SHEPC (Nucleoside diphosphate kinase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ndk PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 +ERTF IKPD V + I I +RFE G K+VA K++ +KE A+ Y + ER FF L F++SGP++ V EGE + R+++GAT+P ++ PGTIR D A Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFA 108 The following BLAST results are available for this feature:
BLAST of FC923113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923113 ID=FC923113; Name=FC923113; organism=Citrus clementina; type=EST; length=699bpback to top |