FC923113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SYNJA (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndk PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.272e-35 Identity = 68/111 (61.26%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 MERTFIAIKPDGVQRGL+ II R E +G++LV +K+V S+E A+ HY + +ERPFF GL +F++SGPV+AMVW+G+GVI RKLIG T+P +EPGTIRGD + +GR Sbjct: 1 MERTFIAIKPDGVQRGLVGSIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHRERPFFPGLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLDAEPGTIRGDFGIDIGR 111 HSP 2 Score: 21.1718 bits (43), Expect = 2.272e-35 Identity = 6/9 (66.67%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 672 KNIIHGSDG 698 +N++HGSDG Sbjct: 111 RNLVHGSDG 119
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDKA_MOUSE (Nucleoside diphosphate kinase A OS=Mus musculus GN=Nme1 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.883e-35 Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 337 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 A ERTFIAIKPDGVQRGL+ EII RFE+KGF+LV +K + S++ ++HY DLK+RPFF GL +++ SGPV+AMVWEG V+ GR ++G T+P S+PGTIRGD + VGR Sbjct: 2 ANSERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQASEDLLKEHYTDLKDRPFFTGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGR 114
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDKA1_BOVIN (Nucleoside diphosphate kinase A 1 OS=Bos taurus GN=NME1-1 PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.883e-35 Identity = 70/113 (61.95%), Postives = 89/113 (78.76%), Query Frame = 1 Query: 337 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 A ERTFIAIKPDGVQRGLI EII RFE+KGF+LVA+K + S++ ++HY DLK+RPFF GL +++ SGPV+AMVWEG V+ GR ++G T+P S+PGTIRGD + VGR Sbjct: 2 ANSERTFIAIKPDGVQRGLIGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGR 114
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.883e-35 Identity = 69/112 (61.61%), Postives = 87/112 (77.68%), Query Frame = 1 Query: 340 EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 E+E T+I IKPDGVQRGL+ EIISRFE+KGFKL +K+ KE A++HY DL+ +PFF L ++++SGPV+ M WEG GV+ RKLIGAT+P +EPGTIRGDLAV GR Sbjct: 83 EVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATNPLNAEPGTIRGDLAVQTGR 194
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.883e-35 Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 340 EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ++E T+I IKPDGVQRGL+ EIISRFE+KGFKL+ +K+ KE A++HY DLK + F+ L ++++SGPV+ M WEG GV+ RKLIGATDP ++EPGTIRGDLAV GR Sbjct: 84 QVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLIGLKMYPCPKELAEEHYKDLKAKSFYQKLIDYITSGPVVCMAWEGVGVVASSRKLIGATDPLQAEPGTIRGDLAVQTGR 195
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDKA_CANFA (Nucleoside diphosphate kinase A OS=Canis familiaris GN=NME1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.917e-35 Identity = 67/113 (59.29%), Postives = 89/113 (78.76%), Query Frame = 1 Query: 337 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 A ERTFIAIKPDGVQR L+ EII RFE+KGF+L+A+K++ S++ ++HY DLK+RPFF GL +++ SGPV+AMVWEG V+ GR ++G T+P S+PGTIRGD + VGR Sbjct: 2 ANSERTFIAIKPDGVQRSLVGEIIKRFEQKGFRLIAMKLIQASEDLLKEHYIDLKDRPFFAGLVKYMQSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGR 114
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.917e-35 Identity = 76/162 (46.91%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 190 AAVTFSGKLPYLVSSFGRAGSSTASRSWLSGAIAIPAAAYMLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 A V F L F ++ASR L + + + + L ++E T+I +KPDG+QRGL+ EIISRFE+KGFKL+ +K+ KE A++HY DL + FF L E+++SGPV+ M WEG GV+ RKLIG TDP ++EPGTIRGDLAV GR Sbjct: 33 ARVNFRTALAAFRPQFRLFSRNSASRRRLRASSSAESGIF-LPHLVASMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGR 193
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDKA_PONAB (Nucleoside diphosphate kinase A OS=Pongo abelii GN=NME1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 337 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 A ERTFIAIKPDGVQRGL+ EII RFE+KGF+LV +K + S++ ++HY DLK+RPFF GL +++ SGPV+AMVWEG V+ GR ++G T+P S+PGTIRGD + VGR Sbjct: 2 ANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGR 114
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDKA_HUMAN (Nucleoside diphosphate kinase A OS=Homo sapiens GN=NME1 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 337 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 A ERTFIAIKPDGVQRGL+ EII RFE+KGF+LV +K + S++ ++HY DLK+RPFF GL +++ SGPV+AMVWEG V+ GR ++G T+P S+PGTIRGD + VGR Sbjct: 2 ANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGR 114
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDKA2_BOVIN (Nucleoside diphosphate kinase A 2 OS=Bos taurus GN=NME1-2 PE=1 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 69/113 (61.06%), Postives = 89/113 (78.76%), Query Frame = 1 Query: 337 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 A ERTFIAIKPDGVQRGL+ EII RFE+KGF+LVA+K + S++ ++HY DLK+RPFF GL +++ SGPV+AMVWEG V+ GR ++G T+P S+PGTIRGD + VGR Sbjct: 2 ANSERTFIAIKPDGVQRGLMGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGR 114 The following BLAST results are available for this feature:
BLAST of FC923113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923113 ID=FC923113; Name=FC923113; organism=Citrus clementina; type=EST; length=699bpback to top |