FC923113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDKM_DICDI (Nucleoside diphosphate kinase, mitochondrial OS=Dictyostelium discoideum GN=ndkM PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.211e-33 Identity = 71/110 (64.55%), Postives = 85/110 (77.27%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ER+FIAIK QR LI EII+RFE+KGFKLV IKI+VP+ E A KHY DL ++PFFNGL +F SSG V+AMV+EG+ V+ GR LIGATDP +S PGTIR DL + GR Sbjct: 73 ERSFIAIKVSSTQRRLIGEIIARFEKKGFKLVGIKILVPTPEHAAKHYEDLNKKPFFNGLVKFFSSGAVVAMVFEGKDVVRTGRVLIGATDPSQSAPGTIRFDLCIETGR 182
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSI (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. indica GN=NDKR PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.211e-33 Identity = 68/111 (61.26%), Postives = 87/111 (78.38%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ME++FI IKPDGVQRGLI +IISRFE+KGF L +K + + FAQ+HY DL ++PFF GL E++ SGPV+AMVWEG+ V+ GR++IGAT P ++ PGTIR D AV VGR Sbjct: 1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFFLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGR 111
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK3_MOUSE (Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 1.553e-33 Identity = 65/110 (59.09%), Postives = 88/110 (80.00%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTF+A+KPDGVQR L+ EI+ RFERKGFKLVA+K+V S+E ++HY +L+E+PF++ L +++SSGPV+AMVW+G V+ R LIGATDP + PGTIRGD + VG+ Sbjct: 22 ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELREKPFYSRLVKYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGK 131 HSP 2 Score: 20.7866 bits (42), Expect = 1.553e-33 Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 3 Query: 672 KNIIHGSD 695 KN+IHGSD Sbjct: 131 KNVIHGSD 138
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33 Identity = 67/109 (61.47%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVV 669 MERT++ IKPDGVQR LI EI+SRFE+KGF L+ K++ +KE A+ HY + KERPFF L +F++SGPV AMVWEGE VI RK++GAT+P +EPGTIRGD V V Sbjct: 1 MERTYLMIKPDGVQRNLIGEIVSRFEKKGFTLIGAKLMTVTKEQAETHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGATNPADAEPGTIRGDFGVQV 109
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK3_HUMAN (Nucleoside diphosphate kinase 3 OS=Homo sapiens GN=NME3 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.023e-33 Identity = 64/110 (58.18%), Postives = 87/110 (79.09%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTF+A+KPDGVQR L+ EI+ RFERKGFKLVA+K+V S+E ++HY +L+ERPF+ L ++++SGPV+AMVW+G V+ R LIGAT+P + PGTIRGD + VG+ Sbjct: 22 ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGK 131 HSP 2 Score: 20.4014 bits (41), Expect = 2.023e-33 Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 3 Query: 672 KNIIHGSD 695 KN+IHGSD Sbjct: 131 KNLIHGSD 138
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_GLOVI (Nucleoside diphosphate kinase OS=Gloeobacter violaceus GN=ndk PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.025e-32 Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 MERTFIAIKPDGVQRGL+ EI+ RFER+GFKLV +K++ S+ AQKHY + KERPFF GL F++S PV+A+V EG+GV+ R ++G T+P S GTIRGD + +GR Sbjct: 1 MERTFIAIKPDGVQRGLVGEILQRFERRGFKLVGLKLMQVSEALAQKHYAEHKERPFFGGLVAFITSSPVVAVVLEGKGVVATARAMMGVTNPLNSPLGTIRGDYGIDIGR 111
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_HELMI (Nucleoside diphosphate kinase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=ndk PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.339e-32 Identity = 63/111 (56.76%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 MERT++ IKPDGVQRGL+ EIISRFE+KGFKLV +K + ++E A+KHY + +PFF GL +++ SGPV+AM WEG+ +++ R+++GAT+P K+ PGTIRG AV +GR Sbjct: 1 MERTYLMIKPDGVQRGLVGEIISRFEKKGFKLVGMKFLRLTREMAEKHYAEHVGKPFFAGLVDYIISGPVVAMCWEGKDIVSVSREMMGATNPAKAAPGTIRGTYAVDIGR 111
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_SYMTH (Nucleoside diphosphate kinase OS=Symbiobacterium thermophilum GN=ndk PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.681e-32 Identity = 64/106 (60.38%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLA 660 MER+F+ +KPDGVQRGLI E+ISR ER+G KLVA K++ S+E A++HY LK++PFF L EF++SGPV+AMVWEG I+ RK +GAT+P +EPGTIR D A Sbjct: 1 MERSFVMVKPDGVQRGLIGEVISRLERRGLKLVAAKLMRVSRELAEEHYAQLKDKPFFPSLIEFITSGPVMAMVWEGPNAISIIRKTMGATNPANAEPGTIRADFA 106 HSP 2 Score: 21.1718 bits (43), Expect = 1.681e-32 Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 657 SCCCWKNIIHGSDG 698 +C N++HGSDG Sbjct: 106 ACDVSYNVVHGSDG 119
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_ASHGO (Nucleoside diphosphate kinase OS=Ashbya gossypii GN=NDK1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.983e-32 Identity = 63/110 (57.27%), Postives = 87/110 (79.09%), Query Frame = 1 Query: 346 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGR 675 ERTFIAIKPDGVQRGLIS+I+SRFE +G+KLV IK+V P++ ++HY + E+PFF + +++SGP++A VWEG+ V+ GR ++GAT+P S PGTIRGD A+ +GR Sbjct: 4 ERTFIAIKPDGVQRGLISKILSRFESRGYKLVGIKLVTPTENLLKQHYAEHVEKPFFPKMLAYMTSGPILATVWEGKDVVKQGRVILGATNPLNSAPGTIRGDFALDMGR 113
BLAST of FC923113 vs. ExPASy Swiss-Prot
Match: NDK_THET8 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ndk PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32 Identity = 62/109 (56.88%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 343 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVV 669 MERTF+ IKPDGV+RGL+ EI++RFERKGF++ A+K++ S+E A++HY + +E+PFF GL F++SGPV+AMV EG GV+ RK++GAT P+ + PGTIRGD A + Sbjct: 1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTI 109 The following BLAST results are available for this feature:
BLAST of FC923113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923113 ID=FC923113; Name=FC923113; organism=Citrus clementina; type=EST; length=699bpback to top |